Figure 5
A real-time NADH-coupled ATPase assay was performed by adding 1 mM ATP (saturating ATP [8]) to start the reaction followed by 50 ng of pUC18 DNA (indicated as a break in the trace). (A) Example traces clearly show that ATBC reduces the rate of ATP consumption by UvrA. The slopes provide the Vmax ATP consumption rate. (B) kcat values were calculated from the known concentration of UvrA. kcat values in the presence of ATP only are shown in dark bars, and with both ATP and DNA in light bars. ATBC reduces the observed kcat by ∼70%. Experiments were performed at room temperature in the ABC buffer, no ADP accumulates in this assay. The error bars represent the standard error of the mean (UvrA n = 26, UvrA + ATBC n = 6). *P = 0.0002, **P < 0.0001 (unpaired t-test).
ATBC inhibits the E. coli UvrA ATPase activity

A real-time NADH-coupled ATPase assay was performed by adding 1 mM ATP (saturating ATP [8]) to start the reaction followed by 50 ng of pUC18 DNA (indicated as a break in the trace). (A) Example traces clearly show that ATBC reduces the rate of ATP consumption by UvrA. The slopes provide the Vmax ATP consumption rate. (B) kcat values were calculated from the known concentration of UvrA. kcat values in the presence of ATP only are shown in dark bars, and with both ATP and DNA in light bars. ATBC reduces the observed kcat by ∼70%. Experiments were performed at room temperature in the ABC buffer, no ADP accumulates in this assay. The error bars represent the standard error of the mean (UvrA n = 26, UvrA + ATBC n = 6). *P = 0.0002, **P < 0.0001 (unpaired t-test).

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