Volume 41 Issue 7 | Bioscience Reports

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Volume 41, Issue 7

July 2021

Cover Image

Cover Image

Evolutionarily conserved proteins such as Akirin/Subolesin play a key role in the regulation of gene expression involved in multiple cellular biological processes. Akirin2 not only links chromatin remodelers with transcriptional activation, but also interacts with histones for regulation of gene expression. The image shows a piece from the series “Earth, corn, life” by Juan Francisco Elso Padilla, 1982 (left image courtesy of KGJ Collection, Ciudad Real, Spain), and transfection of human HL60 cells with fluorescein-conjugated antibody (right image). Read more about the function of cofactor Ak-irin2 in research piece by Artigas-Jerónimo et al. in this issue of Bioscience Reports (volume 41, issue 7).

ISSN 0144-8463

EISSN 1573-4935

Review Articles

Heparanase as a potential player in SARS-CoV-2 infection and induced coagulopathy

Safa Kinaneh; Iyad Khamaysi; Tony Karram; Shadi Hamoud

Biosci Rep (2021) 41 (7): BSR20210290.

Abstract

View Articletitled, Heparanase as a potential player in SARS-CoV-2 infection and induced coagulopathy

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Biological implications of genetic variations in autism spectrum disorders from genomics studies

Yue Zhang; Xuanshi Liu; Ruolan Guo; Wenjian Xu; Qi Guo; Chanjuan Hao; Xin Ni; Wei Li

Biosci Rep (2021) 41 (7): BSR20210593.

Abstract

View Articletitled, Biological implications of genetic variations in autism spectrum disorders from genomics studies

Supplementary data

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Multiple roles of haem in cystathionine β-synthase activity: implications for hemin and other therapies of acute hepatic porphyria

Abdulla A.-B. Badawy

Biosci Rep (2021) 41 (7): BSR20210935.

Abstract

View Articletitled, Multiple roles of haem in cystathionine β-synthase activity: implications for hemin and other therapies of acute hepatic porphyria

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Recent advancements in the exploitation of the gut microbiome in the diagnosis and treatment of colorectal cancer

Katie J. Stott; Bethan Phillips; Lee Parry; Stephanie May

Biosci Rep (2021) 41 (7): BSR20204113.

Abstract

View Articletitled, Recent advancements in the exploitation of the gut microbiome in the diagnosis and treatment of colorectal cancer

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Commentaries

Revisiting CCL-type chemokines in breast cancer and its milieu: prominent targetable chemokines, CCL8 and CCL21

Nese Unver

Biosci Rep (2021) 41 (7): BSR20210033.

Abstract

View Articletitled, Revisiting CCL-type chemokines in breast cancer and its milieu: prominent targetable chemokines, CCL8 and CCL21

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Research Articles

Differential expression of miRNAs as biomarkers for predicting the outcomes of diffuse large B-cell lymphoma patients

Maogui Hu; Xinchen Wang; Ning Liu; Kaiyang Ding; Guihong Zhang; Xiaosi Liu

Biosci Rep (2021) 41 (7): BSR20201551.

Abstract

View Articletitled, Differential expression of miRNAs as biomarkers for predicting the outcomes of diffuse large B-cell lymphoma patients

Supplementary data

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Early B-cell factors involve in the tumorigenesis and predict the overall survival of gastric cancer

Qing Wang; Jiahong Liang; Xianyu Hu; Songgang Gu; Qiaodong Xu; Jiang Yan

Biosci Rep (2021) 41 (7): BSR20210055.

Abstract

View Articletitled, Early B-cell factors involve in the tumorigenesis and predict the overall survival of gastric cancer

Supplementary data

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mem-iLID, a fast and economic protein purification method

Ruijing Tang; Shang Yang; Georg Nagel; Shiqiang Gao

Biosci Rep (2021) 41 (7): BSR20210800.

Abstract

View Articletitled, mem-iLID, a fast and economic protein purification method

Supplementary data

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RAGE-mediated functional DNA methylated modification contributes to cigarette smoke-induced airway inflammation in mice

Ping Li; Tao Wang; Mei Chen; Jun Chen; Yongchun Shen; Lei Chen

Biosci Rep (2021) 41 (7): BSR20210308.

Abstract

View Articletitled, RAGE-mediated functional DNA methylated modification contributes to cigarette smoke-induced airway inflammation in mice

Supplementary data

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Alkaline phosphatase-to-albumin ratio as a novel predictor of long-term adverse outcomes in coronary artery disease patients who underwent PCI

Xin-Ya Dai; Ying-Ying Zheng; Jun-Nan Tang; Wei Wang; Qian-Qian Guo; Shan-Shan Yin; Jian-Chao Zhang; Meng-Die Cheng; Feng-Hua Song; Zhi-Yu Liu; Kai Wang; Li-Zhu Jiang; Lei Fan; Xiao-Ting Yue; Yan Bai; Zeng-Lei Zhang; Ru-Jie Zheng; Jin-Ying Zhang

Biosci Rep (2021) 41 (7): BSR20203904.

Abstract

View Articletitled, Alkaline phosphatase-to-albumin ratio as a novel predictor of long-term adverse outcomes in coronary artery disease patients who underwent PCI

Supplementary data

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Endostatin attenuates heart failure via inhibiting reactive oxygen species in myocardial infarction rats

Xuguang Xu; Tingbo Jiang; Yong Li; Liusha Kong

Biosci Rep (2021) 41 (7): BSR20200787.

Abstract

View Articletitled, Endostatin attenuates heart failure via inhibiting reactive oxygen species in myocardial infarction rats

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Monocyte-to-albumin ratio as a novel predictor of long-term adverse outcomes in patients after percutaneous coronary intervention

Zeng-Lei Zhang; Qian-Qian Guo; Jun-Nan Tang; Jian-Chao Zhang; Meng-Die Cheng; Feng-Hua Song; Zhi-Yu Liu; Kai Wang; Li-Zhu Jiang; Lei Fan; Xiao-Ting Yue; Yan Bai; Xin-Ya Dai; Ru-Jie Zheng; Ying-Ying Zheng; Jin-Ying Zhang

Biosci Rep (2021) 41 (7): BSR20210154.

Abstract

View Articletitled, Monocyte-to-albumin ratio as a novel predictor of long-term adverse outcomes in patients after percutaneous coronary intervention

Supplementary data

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Glucose regulates expression of pro-inflammatory genes, IL-1β and IL-12, through a mechanism involving hexosamine biosynthesis pathway-dependent regulation of α-E catenin

Waruni C. Dissanayake; Jin Kyo Oh; Brie Sorrenson; Peter R. Shepherd

Biosci Rep (2021) 41 (7): BSR20211066.

Abstract

View Articletitled, Glucose regulates expression of pro-inflammatory genes, IL-1β and IL-12, through a mechanism involving hexosamine biosynthesis pathway-dependent regulation of α-E catenin

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Integrated bioinformatics analysis revealed the regulation of angiogenesis by tumor cells in hepatocellular carcinoma

Meisi Huo; Kangkang Yu; Yahui Zheng; Lu Liu; Hao Zhao; Xiaoqi Li; Chong Huang; Jubo Zhang

Biosci Rep (2021) 41 (7): BSR20210126.

Abstract

View Articletitled, Integrated bioinformatics analysis revealed the regulation of angiogenesis by tumor cells in hepatocellular carcinoma

Supplementary data

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Construction of a five-gene prognostic model based on immune-related genes for the prediction of survival in pancreatic cancer

Bo Liu; Tingting Fu; Ping He; Chengyou Du; Ke Xu

Biosci Rep (2021) 41 (7): BSR20204301.

Abstract

View Articletitled, Construction of a five-gene prognostic model based on immune-related genes for the prediction of survival in pancreatic cancer

Supplementary data

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Conditioned medium of IGF1-induced synovial membrane mesenchymal stem cells increases chondrogenic and chondroprotective markers in chondrocyte inflammation

Marlina Marlina; Rizki Rahmadian; Armenia Armenia; Jenifer Kiem Aviani; Ika Adhani Sholihah; Hanna Sari Widya Kusuma; Alya Mardhotillah Azizah; Nur Elida; Wahyu Widowati

Biosci Rep (2021) 41 (7): BSR20202038.

Abstract

View Articletitled, Conditioned medium of IGF1-induced synovial membrane mesenchymal stem cells increases chondrogenic and chondroprotective markers in chondrocyte inflammation

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Serum HBV pregenomic RNA exhibited opposite associations with NK^dim and NK^bright cell immunity in treatment-naïve chronic hepatitis B patients

Yurong Gu; Zexuan Huang; Xiaoyan Li; Youming Chen; Chunhong Liao; Yanhua Bi; Yuehua Huang

Biosci Rep (2021) 41 (7): BSR20210600.

Abstract

View Articletitled, Serum HBV pregenomic RNA exhibited opposite associations with NKdim and NKbright cell immunity in treatment-naïve chronic hepatitis B patients

Supplementary data

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Systemic inflammation down-regulates glyoxalase-1 expression: an experimental study in healthy males

Rob G.H. Driessen; Dorien Kiers; Casper G. Schalkwijk; Jean L.J.M. Scheijen; Jelle Gerretsen; Peter Pickkers; Marcel C.G. van de Poll; Iwan C.C. van der Horst; Dennis C.J.J. Bergmans; Matthijs Kox; Bas C.T. van Bussel

Biosci Rep (2021) 41 (7): BSR20210954.

Abstract

View Articletitled, Systemic inflammation down-regulates glyoxalase-1 expression: an experimental study in healthy males

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FOXD1 is a prognostic biomarker and correlated with macrophages infiltration in head and neck squamous cell carcinoma

Huazhen Liang; Chunning Zhang; Chaoming Li; Changguo Li; Yanli Wang; Huaming Lin

Biosci Rep (2021) 41 (7): BSR20202929.

Abstract

View Articletitled, FOXD1 is a prognostic biomarker and correlated with macrophages infiltration in head and neck squamous cell carcinoma

Supplementary data

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Antibody microarray analysis of the amniotic fluid proteome for predicting the outcome of rescue cerclage in patients with cervical insufficiency

Subeen Hong; Kyo Hoon Park; Young Eun Lee; Sue Shin; Hyeon Ji Kim; Yu Mi Kim

Biosci Rep (2021) 41 (7): BSR20210174.

Abstract

View Articletitled, Antibody microarray analysis of the amniotic fluid proteome for predicting the outcome of rescue cerclage in patients with cervical insufficiency

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Association of the polymorphism of the vitamin D receptor gene (VDR) with the risk of leprosy in the Brazilian Amazon

Jasna Letícia Pinto Paz; Maria do Perpétuo Socorro Corrêa Amador Silvestre; Letícia Siqueira Moura; Ismari Perini Furlaneto; Yan Corrêa Rodrigues; Karla Valéria Batista Lima; Luana Nepomuceno Gondim Costa Lima

Biosci Rep (2021) 41 (7): BSR20204102.

Abstract

View Articletitled, Association of the polymorphism of the vitamin D receptor gene (VDR) with the risk of leprosy in the Brazilian Amazon

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Hypoxia-induced PTTG3P contributes to colorectal cancer glycolysis and M2 phenotype of macrophage

Yue Wang; Guilin Yu; Yiyang Liu; Longfei Xie; Jinnian Ge; Guohua Zhao; Jie Lin

Biosci Rep (2021) 41 (7): BSR20210764.

Abstract

View Articletitled, Hypoxia-induced PTTG3P contributes to colorectal cancer glycolysis and M2 phenotype of macrophage

Supplementary data

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Polymorphism rs7214723 in CAMKK1: a new genetic variant associated with cardiovascular diseases

Sofia Beghi; Francesca Cavaliere; Matteo Manfredini; Sandro Ferrarese; Claudio Corazzari; Cesare Beghi; Annamaria Buschini

Biosci Rep (2021) 41 (7): BSR20210326.

Abstract

View Articletitled, Polymorphism rs7214723 in CAMKK1: a new genetic variant associated with cardiovascular diseases

Supplementary data

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Histone H3K4me1 strongly activates the DNase I hypersensitive sites in super-enhancers than those in typical enhancers

Yujin Kang; Jin Kang; AeRi Kim

Biosci Rep (2021) 41 (7): BSR20210691.

Abstract

View Articletitled, Histone H3K4me1 strongly activates the DNase I hypersensitive sites in super-enhancers than those in typical enhancers

Supplementary data

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The effect of the flavonol rutin on serum and liver iron content in a genetic mouse model of iron overload

Zachary J. Hawula; Eriza S. Secondes; Daniel F. Wallace; Gautam Rishi; V. Nathan Subramaniam

Biosci Rep (2021) 41 (7): BSR20210720.

Abstract

View Articletitled, The effect of the flavonol rutin on serum and liver iron content in a genetic mouse model of iron overload

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Prostasin regulates PD-L1 expression in human lung cancer cells

Li-Mei Chen; Julius C. Chai; Bin Liu; Tara M. Strutt; K. Kai McKinstry; Karl X. Chai

Biosci Rep (2021) 41 (7): BSR20211370.

Abstract

View Articletitled, Prostasin regulates PD-L1 expression in human lung cancer cells

Supplementary data

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RNA sequencing reveals potential interacting networks between the altered transcriptome and ncRNome in the skeletal muscle of diabetic mice

Devesh Kesharwani; Amit Kumar; Mukta Poojary; Vinod Scaria; Malabika Datta

Biosci Rep (2021) 41 (7): BSR20210495.

Abstract

View Articletitled, RNA sequencing reveals potential interacting networks between the altered transcriptome and ncRNome in the skeletal muscle of diabetic mice

Supplementary data

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Circulating lncRNA UCA1 and lncRNA PGM5-AS1 act as potential diagnostic biomarkers for early-stage colorectal cancer

Minghui Wang; Zhijun Zhang; Deng Pan; Zhigang Xin; Fan Bu; Yue Zhang; Qingwu Tian; Xiaodong Feng

Biosci Rep (2021) 41 (7): BSR20211115.

Abstract

View Articletitled, Circulating lncRNA UCA1 and lncRNA PGM5-AS1 act as potential diagnostic biomarkers for early-stage colorectal cancer

Supplementary data

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Evaluation of anticancer effects of Juniperus communis extract on hepatocellular carcinoma cells in vitro and in vivo

Nan-Chieh Huang; Ru-Lai Huang; Xiao-Fan Huang; Kai-Fu Chang; Chien-Ju Lee; Chih-Yen Hsiao; Shan-Chih Lee; Nu-Man Tsai

Biosci Rep (2021) 41 (7): BSR20211143.

Abstract

View Articletitled, Evaluation of anticancer effects of Juniperus communis extract on hepatocellular carcinoma cells in vitro and in vivo

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Multi-omic analyses of hepatocellular carcinoma to determine immunological characteristics and key nodes in gene-expression network

Zhihui Wang; Shuijun Zhang

Biosci Rep (2021) 41 (7): BSR20211241.

Abstract

View Articletitled, Multi-omic analyses of hepatocellular carcinoma to determine immunological characteristics and key nodes in gene-expression network

Supplementary data

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Identification of survival-related alternative splicing signatures in acute myeloid leukemia

Biyu Zhang; Lei Yang; Xin Wang; Denggang Fu

Biosci Rep (2021) 41 (7): BSR20204037.

Abstract

View Articletitled, Identification of survival-related alternative splicing signatures in acute myeloid leukemia

Supplementary data

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Genome survey and microsatellite motif identification of Pogonophryne albipinna

Euna Jo; Yll Hwan Cho; Seung Jae Lee; Eunkyung Choi; Jinmu Kim; Jeong-Hoon Kim; Young Min Chi; Hyun Park

Biosci Rep (2021) 41 (7): BSR20210824.

Abstract

View Articletitled, Genome survey and microsatellite motif identification of Pogonophryne albipinna

Supplementary data

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Mechanism of BIP-4 mediated inhibition of InsP₃Kinase-A

Themistoklis Paraschiakos; Wilhelm Flat; Ya Chen; Johannes Kirchmair; Sabine Windhorst

Biosci Rep (2021) 41 (7): BSR20211259.

Abstract

View Articletitled, Mechanism of BIP-4 mediated inhibition of InsP3Kinase-A

Supplementary data

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Reversal of alopecia areata, osteoporosis follow treatment with activation of Tgr5 in mice

Xiaohui Zhou; Zhiqiang Guan; Xiao Jin; Jianbin Zhao; Guisheng Chen; Jicun Ding; Yile Ren; Xiaoxiang Zhai; Qiyun Zhou; Zhiyuan Guan

Biosci Rep (2021) 41 (7): BSR20210609.

Abstract

View Articletitled, Reversal of alopecia areata, osteoporosis follow treatment with activation of Tgr5 in mice

Supplementary data

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Function of cofactor Akirin2 in the regulation of gene expression in model human Caucasian neutrophil-like HL60 cells

Sara Artigas-Jerónimo; Margarita Villar; Agustín Estrada-Peña; Adrián Velázquez-Campoy; Pilar Alberdi; José de la Fuente

Biosci Rep (2021) 41 (7): BSR20211120.

Abstract

View Articletitled, Function of cofactor Akirin2 in the regulation of gene expression in model human Caucasian neutrophil-like HL60 cells

Supplementary data

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Inhibition of lncRNA-NEAT1 sensitizes 5-Fu resistant cervical cancer cells through de-repressing the microRNA-34a/LDHA axis

Xuecheng Shao; Xuehui Zheng; Dan Ma; Yang Liu; Guoyan Liu

Biosci Rep (2021) 41 (7): BSR20200533.

Abstract

View Articletitled, Inhibition of lncRNA-NEAT1 sensitizes 5-Fu resistant cervical cancer cells through de-repressing the microRNA-34a/LDHA axis

Supplementary data

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Increased sTREM-1 plasma concentrations are associated with poor clinical outcomes in patients with COVID-19

Aline H. de Nooijer; Inge Grondman; Simon Lambden; Emma J. Kooistra; Nico A.F. Janssen; Matthijs Kox; Peter Pickkers; Leo A.B. Joosten; Frank L. van de Veerdonk; Marc Derive; Sebastien Gibot; Mihai G. Netea; on behalf of RCI-COVID-19 study group

Biosci Rep (2021) 41 (7): BSR20210940.

Abstract

View Articletitled, Increased sTREM-1 plasma concentrations are associated with poor clinical outcomes in patients with COVID-19

Supplementary data

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Glycogen synthase kinase 3β promotes osteosarcoma invasion and migration via regulating PTEN and phosphorylation of focal adhesion kinase

Wei Mai; Lingyu Kong; Hongwei Yu; Junjie Bao; Chunyu Song; Guofan Qu

Biosci Rep (2021) 41 (7): BSR20193514.

Abstract

View Articletitled, Glycogen synthase kinase 3β promotes osteosarcoma invasion and migration via regulating PTEN and phosphorylation of focal adhesion kinase

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LncRNA NEAT1 promotes glioma cancer progression via regulation of miR-98-5p/BZW1

Yabin Li; Xirui Wang; Zhihuang Zhao; Jinxing Shang; Gang Li; Ruijian Zhang

Biosci Rep (2021) 41 (7): BSR20200767.

Abstract

View Articletitled, LncRNA NEAT1 promotes glioma cancer progression via regulation of miR-98-5p/BZW1

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A new discovery of STAT4 single nucleotide polymorphisms associated with hepatocellular carcinoma risk in Chinese Han population: a case–control study

Xu Chao; Jieqiong Wu; Wei Zhang; Xuesong Feng; Luyan Zhao; Feng Huang; Chao Jiang

Biosci Rep (2021) 41 (7): BSR20210124.

Abstract

View Articletitled, A new discovery of STAT4 single nucleotide polymorphisms associated with hepatocellular carcinoma risk in Chinese Han population: a case–control study

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Identification of hub genes in colorectal cancer based on weighted gene co-expression network analysis and clinical data from The Cancer Genome Atlas

Yu Zhang; Jia Luo; Zhe Liu; Xudong Liu; Ying Ma; Bohang Zhang; Yuxuan Chen; Xiaofeng Li; Zhiguo Feng; Ningning Yang; Dayun Feng; Lei Wang; Xinqiang Song

Biosci Rep (2021) 41 (7): BSR20211280.

Abstract

View Articletitled, Identification of hub genes in colorectal cancer based on weighted gene co-expression network analysis and clinical data from The Cancer Genome Atlas

Supplementary data

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LncRNA SNHG15 modulates gastric cancer tumorigenesis by impairing miR-506-5p expression

Zhiping Chen; Tianyu Zhong; Tao Li; Jinghua Zhong; Yang Tang; Zhanyu Liu; Baodian Ling; Lanfeng Wang

Biosci Rep (2021) 41 (7): BSR20204177.

Abstract

View Articletitled, LncRNA SNHG15 modulates gastric cancer tumorigenesis by impairing miR-506-5p expression

Supplementary data

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FOXD1 expression in head and neck squamous carcinoma: a study based on TCGA, GEO and meta-analysis

Junjie Huang; Bin Liang; Tianjiao Wang

Biosci Rep (2021) 41 (7): BSR20210158.

Abstract

View Articletitled, FOXD1 expression in head and neck squamous carcinoma: a study based on TCGA, GEO and meta-analysis

Supplementary data

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A microfluidic array device for single cell capture and intracellular Ca²⁺ response analysis induced by dynamic biochemical stimulus

Wenbo Wei; Miao Zhang; Zhongyuan Xu; Weifeng Li; Lixin Cheng; Hongbao Cao; Min Ma; Zongzheng Chen

Biosci Rep (2021) 41 (7): BSR20210719.

Abstract

View Articletitled, A microfluidic array device for single cell capture and intracellular Ca2+ response analysis induced by dynamic biochemical stimulus

Supplementary data

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Clinicopathological and prognostic significance of LINC00673 in human malignancy: a review and meta-analysis

Yurong Zhu; Zhifa Zhang; Hui Peng; Weiping Li; Shaowei Hu; Min Zhao; Weifeng Lin

Biosci Rep (2021) 41 (7): BSR20211175.

Abstract

View Articletitled, Clinicopathological and prognostic significance of LINC00673 in human malignancy: a review and meta-analysis

Supplementary data

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Corrections

Correction: Taenia solium and Taenia crassiceps: miRNomes of the larvae and effects of miR-10-5p and let-7-5p on murine peritoneal macrophages

Biosci Rep (2021) 41 (7): BSR-2019-0152_COR.

Extract

View Articletitled, Correction: Taenia solium and Taenia crassiceps: miRNomes of the larvae and effects of miR-10-5p and let-7-5p on murine peritoneal macrophages

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Correction: Prognostic values of inhibitory κB kinases mRNA expression in human gastric cancer

Biosci Rep (2021) 41 (7): BSR-2018-0617_COR.

Extract

View Articletitled, Correction: Prognostic values of inhibitory κB kinases mRNA expression in human gastric cancer

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Correction: Antioxidative and anti-photoaging activities of neferine upon UV-A irradiation in human dermal fibroblasts

Biosci Rep (2021) 41 (7): BSR-2018-1414_COR.

Extract

View Articletitled, Correction: Antioxidative and anti-photoaging activities of neferine upon UV-A irradiation in human dermal fibroblasts

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Correction: Adiponectin inhibits lipoplysaccharide-induced inflammation and promotes osteogenesis in hPDLCs

Biosci Rep (2021) 41 (7): BSR-2019-2668_COR.

Extract

View Articletitled, Correction: Adiponectin inhibits lipoplysaccharide-induced inflammation and promotes osteogenesis in hPDLCs

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Retractions

Retraction: Effects of MicroRNA-146a on the proliferation and apoptosis of human osteochondrocytes by targeting TRAF6 through the NF- κB signalling pathway

Biosci Rep (2021) 41 (7): BSR-2017-0180C_RET.

Extract

View Articletitled, Retraction: Effects of MicroRNA-146a on the proliferation and apoptosis of human osteochondrocytes by targeting TRAF6 through the NF- κB signalling pathway

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Retraction: MicroRNA-506 inhibits rheumatoid arthritis fibroblast-like synoviocytes proliferation and induces apoptosis by targeting TLR4

Biosci Rep (2021) 41 (7): BSR-2018-2500_RET.

Extract

View Articletitled, Retraction: MicroRNA-506 inhibits rheumatoid arthritis fibroblast-like synoviocytes proliferation and induces apoptosis by targeting TLR4

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Retraction: Functional analyses of micoRNA-326 in breast cancer development

Biosci Rep (2021) 41 (7): BSR-2019-0787_RET.

Extract

View Articletitled, Retraction: Functional analyses of micoRNA-326 in breast cancer development

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