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Articles

The emerging theme of 3′UTR mRNA isoform regulation in reprogramming of cell metabolism

Qiang Zhang, Bin Tian
Journal: Biochemical Society Transactions
Biochem Soc Trans (2023) BST20221128.
DOI: https://doi.org/10.1042/BST20221128
Published: 12 May 2023
View article titled, The emerging theme of 3′UTR mRNA isoform regulation in reprogramming of cell metabolism
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Articles

The long and short of EJC-independent nonsense-mediated RNA decay

Oscar Muñoz, Mlana Lore, Sujatha Jagannathan
Journal: Biochemical Society Transactions
Biochem Soc Trans (2023) BST20221131.
DOI: https://doi.org/10.1042/BST20221131
Published: 05 May 2023
View article titled, The long and short of EJC-independent nonsense-mediated RNA decay
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Articles

Exploring microRNAs in craniofacial regenerative medicine

Dan Su, Samuel Swearson, Tadkamol Krongbaramee, Hongli Sun, Liu Hong, Brad A. Amendt
Journal: Biochemical Society Transactions
Biochem Soc Trans (2023) 51 (2): 841–854.
DOI: https://doi.org/10.1042/BST20221448
Published: 19 April 2023
View article titled, Exploring microRNAs in craniofacial regenerative medicine
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Articles

Epitranscriptomics: new players in an old game

Alba Coego, Helena Covelo-Molares, Diana Guallar
Journal: Biochemical Society Transactions
Biochem Soc Trans (2023) 51 (2): 783–796.
DOI: https://doi.org/10.1042/BST20221417
Published: 04 April 2023
View article titled, Epitranscriptomics: new players in an old game
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Articles

The biological functions of nonsense-mediated mRNA decay in plants: RNA quality control and beyond

Vivek K. Raxwal, Karel Riha
Journal: Biochemical Society Transactions
Biochem Soc Trans (2023) 51 (1): 31–39.
DOI: https://doi.org/10.1042/BST20211231
Published: 25 January 2023
View article titled, The biological functions of nonsense-mediated mRNA decay in plants: RNA quality control and beyond
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Articles

RNA interference, an emerging component of antiviral immunity in mammals

Dario Pasquale Anobile, Enzo Z. Poirier
Journal: Biochemical Society Transactions
Biochem Soc Trans (2023) 51 (1): 137–146.
DOI: https://doi.org/10.1042/BST20220385
Published: 06 January 2023
View article titled, RNA interference, an emerging component of antiviral immunity in mammals
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Articles

The pleiotropic roles of eIF5A in cellular life and its therapeutic potential in cancer

Aristeidis Panagiotis Sfakianos, Rebecca Mallory Raven, Anne Elizabeth Willis
Journal: Biochemical Society Transactions
Biochem Soc Trans (2022) 50 (6): 1885–1895.
DOI: https://doi.org/10.1042/BST20221035
Published: 13 December 2022
View article titled, The pleiotropic roles of eIF5A in cellular life and its therapeutic potential in cancer
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Articles

Is bRaQCing bad? New roles for ribosome associated quality control factors in stress granule regulation

Noah S. Helton, Stephanie L. Moon
Journal: Biochemical Society Transactions
Biochem Soc Trans (2022) 50 (6): 1715–1724.
DOI: https://doi.org/10.1042/BST20220549
Published: 09 December 2022
View article titled, Is bRaQCing bad? New roles for ribosome associated quality control factors in stress granule regulation
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Articles

The diverse arsenal of type III CRISPR–Cas-associated CARF and SAVED effectors

Jurre A. Steens, Carl Raymund P. Salazar, Raymond H.J. Staals
Journal: Biochemical Society Transactions
Biochem Soc Trans (2022) 50 (5): 1353–1364.
DOI: https://doi.org/10.1042/BST20220289
Published: 25 October 2022
View article titled, The diverse arsenal of type III CRISPR–Cas-associated CARF and SAVED effectors
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Articles

Cancer cells hijack RNA processing to rewrite the message

Katherine L.B. Borden
Journal: Biochemical Society Transactions
Biochem Soc Trans (2022) 50 (5): 1447–1456.
DOI: https://doi.org/10.1042/BST20220621
Published: 25 October 2022
View article titled, Cancer cells hijack RNA processing to rewrite the message
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Articles

Mechanisms of germ cell survival and plasticity in Caenorhabditis elegans

Wei Cao, Roger Pocock
Journal: Biochemical Society Transactions
Biochem Soc Trans (2022) 50 (5): 1517–1526.
DOI: https://doi.org/10.1042/BST20220878
Published: 05 October 2022
View article titled, Mechanisms of germ cell survival and plasticity in Caenorhabditis elegans
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Articles

Small regulatory RNAs in rice epigenetic regulation

So Young Park, Jungnam Cho, Dong-Hoon Jeong
Journal: Biochemical Society Transactions
Biochem Soc Trans (2022) 50 (3): 1215–1225.
DOI: https://doi.org/10.1042/BST20210336
Published: 17 May 2022
View article titled, Small regulatory RNAs in rice epigenetic regulation
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Articles

Emerging roles of lncRNAs in the pathogenesis, diagnosis, and treatment of trigeminal neuralgia

Tianyi Wang, Liu Liu, Dongzhe Song, Dingming Huang
Journal: Biochemical Society Transactions
Biochem Soc Trans (2022) 50 (2): 1013–1023.
DOI: https://doi.org/10.1042/BST20220070
Published: 19 April 2022
View article titled, Emerging roles of lncRNAs in the pathogenesis, diagnosis, and treatment of trigeminal neuralgia
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Articles

LncRNA: a new perspective on the study of neurological diseases

Yun Ma, Siqi He, Tianhe Gu, Yixuan Liu, Shuya He, Zhisheng Jiang
Journal: Biochemical Society Transactions
Biochem Soc Trans (2022) 50 (2): 951–963.
DOI: https://doi.org/10.1042/BST20211181
Published: 06 April 2022
View article titled, LncRNA: a new perspective on the study of neurological diseases
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Articles

MicroRNAs in neural crest development and neurocristopathies

Marco Antonaci, Grant N. Wheeler
Journal: Biochemical Society Transactions
Biochem Soc Trans (2022) 50 (2): 965–974.
DOI: https://doi.org/10.1042/BST20210828
Published: 06 April 2022
View article titled, MicroRNAs in neural crest development and neurocristopathies
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Articles

Epigenetic regulation of human non-coding RNA gene transcription

Marco Morselli, Giorgio Dieci
Journal: Biochemical Society Transactions
Biochem Soc Trans (2022) 50 (2): 723–736.
DOI: https://doi.org/10.1042/BST20210860
Published: 14 March 2022
View article titled, Epigenetic regulation of human non-coding RNA gene transcription
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Articles

Control of non-productive RNA polymerase II transcription via its early termination in metazoans

Jérôme O. Rouvière, Søren Lykke-Andersen, Torben Heick Jensen
Journal: Biochemical Society Transactions
Biochem Soc Trans (2022) 50 (1): 283–295.
DOI: https://doi.org/10.1042/BST20201140
Published: 15 February 2022
View article titled, Control of non-productive RNA polymerase II transcription via its early termination in metazoans
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Articles

Exploring the multifunctionality of SR proteins

Irena Slišković, Hannah Eich, Michaela Müller-McNicoll
Journal: Biochemical Society Transactions
Biochem Soc Trans (2022) 50 (1): 187–198.
DOI: https://doi.org/10.1042/BST20210325
Published: 23 December 2021
View article titled, Exploring the multifunctionality of SR proteins
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Articles

Regulatory long non-coding RNAs in root growth and development

Thomas Roulé, Martin Crespi, Thomas Blein
Journal: Biochemical Society Transactions
Biochem Soc Trans (2022) 50 (1): 403–412.
DOI: https://doi.org/10.1042/BST20210743
Published: 23 December 2021
View article titled, Regulatory long non-coding RNAs in root growth and development
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Articles

Translational control in cell ageing: an update

Katrina Woodward, Nikolay E. Shirokikh
Journal: Biochemical Society Transactions
Biochem Soc Trans (2021) 49 (6): 2853–2869.
DOI: https://doi.org/10.1042/BST20210844
Published: 16 December 2021
View article titled, Translational control in cell ageing: an update
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Articles

The tandem repeat modules of Xist lncRNA: a swiss army knife for the control of X-chromosome inactivation

Ana Cláudia Raposo, Miguel Casanova, Anne-Valerie Gendrel, Simão Teixeira da Rocha
Journal: Biochemical Society Transactions
Biochem Soc Trans (2021) 49 (6): 2549–2560.
DOI: https://doi.org/10.1042/BST20210253
Published: 09 December 2021
View article titled, The tandem repeat modules of Xist lncRNA: a swiss army knife for the control of X-chromosome inactivation
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Articles

Regulation of spatially restricted gene expression: linking RNA localization and phase separation

Liam C. O'Connell, Kimberly L. Mowry
Journal: Biochemical Society Transactions
Biochem Soc Trans (2021) 49 (6): 2591–2600.
DOI: https://doi.org/10.1042/BST20210320
Published: 25 November 2021
View article titled, Regulation of spatially restricted gene expression: linking RNA localization and phase separation
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Articles

The role of chromatin at transcription-replication conflicts as a genome safeguard

Aleix Bayona-Feliu, Andrés Aguilera
Journal: Biochemical Society Transactions
Biochem Soc Trans (2021) 49 (6): 2727–2736.
DOI: https://doi.org/10.1042/BST20210691
Published: 25 November 2021
View article titled, The role of chromatin at transcription-replication conflicts as a genome safeguard
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Articles

X-chromosome reactivation: a concise review

Alessandra Spaziano, Irene Cantone
Journal: Biochemical Society Transactions
Biochem Soc Trans (2021) 49 (6): 2797–2805.
DOI: https://doi.org/10.1042/BST20210777
Published: 25 November 2021
View article titled, X-chromosome reactivation: a concise review
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Articles

Applications of Cryo-EM in small molecule and biologics drug design

Joshua A. Lees, Joao M. Dias, Seungil Han
Journal: Biochemical Society Transactions
Biochem Soc Trans (2021) 49 (6): 2627–2638.
DOI: https://doi.org/10.1042/BST20210444
Published: 23 November 2021
View article titled, Applications of Cryo-EM in small molecule and biologics drug design
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Articles

LARP6 proteins in plants

Cécile Bousquet-Antonelli
Journal: Biochemical Society Transactions
Biochem Soc Trans (2021) 49 (5): 1975–1983.
DOI: https://doi.org/10.1042/BST20200715
Published: 28 October 2021
View article titled, LARP6 proteins in plants
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Articles

To export, or not to export: how nuclear export factor variants resolve Piwi's dilemma

Sheng Wang, Xiaohua Lu, Ding Qiu, Yang Yu
Journal: Biochemical Society Transactions
Biochem Soc Trans (2021) 49 (5): 2073–2079.
DOI: https://doi.org/10.1042/BST20201171
Published: 13 October 2021
View article titled, To export, or not to export: how nuclear export factor variants resolve Piwi's dilemma
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Articles

Structural biology of human telomerase: progress and prospects

Thi Hoang Duong Nguyen
Journal: Biochemical Society Transactions
Biochem Soc Trans (2021) 49 (5): 1927–1939.
DOI: https://doi.org/10.1042/BST20200042
Published: 08 October 2021
View article titled, Structural biology of human telomerase: progress and prospects
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Articles

The role of long non-coding RNAs in the regulation of pancreatic beta cell identity

Maya E. Wilson, Timothy J. Pullen
Journal: Biochemical Society Transactions
Biochem Soc Trans (2021) 49 (5): 2153–2161.
DOI: https://doi.org/10.1042/BST20210207
Published: 28 September 2021
View article titled, The role of long non-coding RNAs in the regulation of pancreatic beta cell identity
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Articles

Single-molecule mRNA and translation imaging in neurons

Jessica Mitchell, Jeffrey A. Chao
Journal: Biochemical Society Transactions
Biochem Soc Trans (2021) 49 (5): 2221–2227.
DOI: https://doi.org/10.1042/BST20210313
Published: 08 September 2021
View article titled, Single-molecule mRNA and translation imaging in neurons
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Articles

Novel insights into the pervasive role of RNA structure in post-transcriptional regulation of gene expression in plants

Huakun Zhang, Yiliang Ding
Journal: Biochemical Society Transactions
Biochem Soc Trans (2021) 49 (4): 1829–1839.
DOI: https://doi.org/10.1042/BST20210318
Published: 26 August 2021
View article titled, Novel insights into the pervasive role of RNA structure in post-transcriptional regulation of gene expression in plants
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Articles

Mechanisms of catalytic RNA molecules

Dulce Alonso, Alfonso Mondragón
Journal: Biochemical Society Transactions
Biochem Soc Trans (2021) 49 (4): 1529–1535.
DOI: https://doi.org/10.1042/BST20200465
Published: 20 August 2021
View article titled, Mechanisms of catalytic RNA molecules
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Articles

What defines the maternal transcriptome?

László Tora, Stéphane D. Vincent
Journal: Biochemical Society Transactions
Biochem Soc Trans (2021) 49 (5): 2051–2062.
DOI: https://doi.org/10.1042/BST20201125
Published: 20 August 2021
View article titled, What defines the maternal transcriptome?
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Articles

Exploring chromatin structural roles of non-coding RNAs at imprinted domains

David Llères, Yui Imaizumi, Robert Feil
Journal: Biochemical Society Transactions
Biochem Soc Trans (2021) 49 (4): 1867–1879.
DOI: https://doi.org/10.1042/BST20210758
Published: 02 August 2021
View article titled, Exploring chromatin structural roles of non-coding RNAs at imprinted domains
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Articles

The expanding world of metabolic enzymes moonlighting as RNA binding proteins

Nicole J. Curtis, Constance J. Jeffery
Journal: Biochemical Society Transactions
Biochem Soc Trans (2021) 49 (3): 1099–1108.
DOI: https://doi.org/10.1042/BST20200664
Published: 10 June 2021
View article titled, The expanding world of metabolic enzymes moonlighting as RNA binding proteins
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Articles

ARS2/SRRT: at the nexus of RNA polymerase II transcription, transcript maturation and quality control

Søren Lykke-Andersen, Jérôme O. Rouvière, Torben Heick Jensen
Journal: Biochemical Society Transactions
Biochem Soc Trans (2021) 49 (3): 1325–1336.
DOI: https://doi.org/10.1042/BST20201008
Published: 01 June 2021
View article titled, ARS2/SRRT: at the nexus of RNA polymerase II transcription, transcript maturation and quality control
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Articles

The role of splicing factors in retinitis pigmentosa: links to cilia

Dale W. Maxwell, Raymond T. O'Keefe, Sudipto Roy, Kathryn E. Hentges
Journal: Biochemical Society Transactions
Biochem Soc Trans (2021) 49 (3): 1221–1231.
DOI: https://doi.org/10.1042/BST20200798
Published: 01 June 2021
View article titled, The role of splicing factors in retinitis pigmentosa: links to cilia
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Articles

Unlocking immune-mediated disease mechanisms with transcriptomics

Emma de Jong, Anthony Bosco
Journal: Biochemical Society Transactions
Biochem Soc Trans (2021) 49 (2): 705–714.
DOI: https://doi.org/10.1042/BST20200652
Published: 12 April 2021
View article titled, Unlocking immune-mediated disease mechanisms with transcriptomics
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Articles

Mechanisms of repeat-associated non-AUG translation in neurological microsatellite expansion disorders

Lydia M. Castelli, Wan-Ping Huang, Ya-Hui Lin, Kung-Yao Chang, Guillaume M. Hautbergue
Journal: Biochemical Society Transactions
Biochem Soc Trans (2021) 49 (2): 775–792.
DOI: https://doi.org/10.1042/BST20200690
Published: 17 March 2021
View article titled, Mechanisms of repeat-associated non-AUG translation in neurological microsatellite expansion disorders
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Articles

The search for RNA-binding proteins: a technical and interdisciplinary challenge

Jeffrey M. Smith, Jarrod J. Sandow, Andrew I. Webb
Journal: Biochemical Society Transactions
Biochem Soc Trans (2021) 49 (1): 393–403.
DOI: https://doi.org/10.1042/BST20200688
Published: 25 January 2021
View article titled, The search for RNA-binding proteins: a technical and interdisciplinary challenge
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Articles

Structure and regulation of coronavirus genomes: state-of-the-art and novel insights from SARS-CoV-2 studies

Ilaria Manfredonia, Danny Incarnato
Journal: Biochemical Society Transactions
Biochem Soc Trans (2021) 49 (1): 341–352.
DOI: https://doi.org/10.1042/BST20200670
Published: 24 December 2020
View article titled, Structure and regulation of coronavirus genomes: state-of-the-art and novel insights from SARS-CoV-2 studies
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Articles

RNA transfer through tunneling nanotubes

Gal Haimovich, Sandipan Dasgupta, Jeffrey E. Gerst
Journal: Biochemical Society Transactions
Biochem Soc Trans (2021) 49 (1): 145–160.
DOI: https://doi.org/10.1042/BST20200113
Published: 24 December 2020
View article titled, RNA transfer through tunneling nanotubes
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Articles

Post-transcriptional control of mitochondrial protein composition in changing environmental conditions

Tatsuhisa Tsuboi, Jordan Leff, Brian M. Zid
Journal: Biochemical Society Transactions
Biochem Soc Trans (2020) 48 (6): 2565–2578.
DOI: https://doi.org/10.1042/BST20200250
Published: 27 November 2020
View article titled, Post-transcriptional control of mitochondrial protein composition in changing environmental conditions
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Articles

RNA matchmaking in chromatin regulation

Stephen K. Wu, Justin T. Roberts, Maggie M. Balas, Aaron M. Johnson
Journal: Biochemical Society Transactions
Biochem Soc Trans (2020) 48 (6): 2467–2481.
DOI: https://doi.org/10.1042/BST20191225
Published: 27 November 2020
View article titled, RNA matchmaking in chromatin regulation
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Articles

Decoding co-/post-transcriptional complexities of plant transcriptomes and epitranscriptome using next-generation sequencing technologies

Anireddy S.N. Reddy, Jie Huang, Naeem H. Syed, Asa Ben-Hur, Suomeng Dong, Lianfeng Gu
Journal: Biochemical Society Transactions
Biochem Soc Trans (2020) 48 (6): 2399–2414.
DOI: https://doi.org/10.1042/BST20190492
Published: 16 November 2020
View article titled, Decoding co-/post-transcriptional complexities of plant transcriptomes and epitranscriptome using next-generation sequencing technologies
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Includes: Supplementary data
Articles

The miR-21 potential of serving as a biomarker for liver diseases in clinical practice

Jiawei Zhang, Dandan Li, Rui Zhang, Peng Gao, Rongxue Peng, Jinming Li
Journal: Biochemical Society Transactions
Biochem Soc Trans (2020) 48 (5): 2295–2305.
DOI: https://doi.org/10.1042/BST20200653
Published: 29 October 2020
View article titled, The miR-21 potential of serving as a biomarker for liver diseases in clinical practice
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Articles

Architectural RNA in chromatin organization

Jitendra Thakur, Steven Henikoff
Journal: Biochemical Society Transactions
Biochem Soc Trans (2020) 48 (5): 1967–1978.
DOI: https://doi.org/10.1042/BST20191226
Published: 08 September 2020
View article titled, Architectural RNA in chromatin organization
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Articles

Alternative splicing in plant abiotic stress responses

Paola Punzo, Stefania Grillo, Giorgia Batelli
Journal: Biochemical Society Transactions
Biochem Soc Trans (2020) 48 (5): 2117–2126.
DOI: https://doi.org/10.1042/BST20200281
Published: 01 September 2020
View article titled, Alternative splicing in plant abiotic stress responses
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Articles

Siblings or doppelgängers? Deciphering the evolution of structured cis-regulatory RNAs beyond homology

Elizabeth C. Gray, Daniel M. Beringer, Michelle M. Meyer
Journal: Biochemical Society Transactions
Biochem Soc Trans (2020) 48 (5): 1941–1951.
DOI: https://doi.org/10.1042/BST20191060
Published: 01 September 2020
View article titled, Siblings or doppelgängers? Deciphering the evolution of structured cis-regulatory RNAs beyond homology
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Articles

Zooming in on protein–RNA interactions: a multi-level workflow to identify interaction partners

Alessio Colantoni, Jakob Rupert, Andrea Vandelli, Gian Gaetano Tartaglia, Elsa Zacco
Journal: Biochemical Society Transactions
Biochem Soc Trans (2020) 48 (4): 1529–1543.
DOI: https://doi.org/10.1042/BST20191059
Published: 21 August 2020
View article titled, Zooming in on protein–RNA interactions: a multi-level workflow to identify interaction partners
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