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Articles

Myosin in chromosome organisation and gene expression

Isabel W. Shahid-Fuente, Christopher P. Toseland
Journal: Biochemical Society Transactions
Biochem Soc Trans (2023) BST20220939.
DOI: https://doi.org/10.1042/BST20220939
Published: 12 May 2023
View article titled, Myosin in chromosome organisation and gene expression
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Articles

Studying histone inheritance in different systems using imaging-based methods and perspectives

Emily Zion, Xin Chen
Journal: Biochemical Society Transactions
Biochem Soc Trans (2023) BST20220983.
DOI: https://doi.org/10.1042/BST20220983
Published: 12 May 2023
View article titled, Studying histone inheritance in different systems using imaging-based methods and perspectives
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Articles

Effectors and effects of arginine methylation

Yalong Wang, Mark T. Bedford
Journal: Biochemical Society Transactions
Biochem Soc Trans (2023) 51 (2): 725–734.
DOI: https://doi.org/10.1042/BST20221147
Published: 04 April 2023
View article titled, Effectors and effects of arginine methylation
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Articles

Modulation of chromatin architecture influences the neuronal nucleus through activity-regulated gene expression

Robert S. Porter, Shigeki Iwase
Journal: Biochemical Society Transactions
Biochem Soc Trans (2023) 51 (2): 703–713.
DOI: https://doi.org/10.1042/BST20220889
Published: 16 March 2023
View article titled, Modulation of chromatin architecture influences the neuronal nucleus through activity-regulated gene expression
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Articles

The influence of high-order chromatin state in the regulation of stem cell fate

Xinpeng Chen, Haiyan Lin, Guohong Li
Journal: Biochemical Society Transactions
Biochem Soc Trans (2022) 50 (6): 1809–1822.
DOI: https://doi.org/10.1042/BST20220763
Published: 09 December 2022
View article titled, The influence of high-order chromatin state in the regulation of stem cell fate
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Articles

Exploring craniofacial and dental development with microRNAs

Dan Su, Tadkamol Krongbaramee, Hongli Sun, Liu Hong, Brad A. Amendt
Journal: Biochemical Society Transactions
Biochem Soc Trans (2022) 50 (6): 1897–1909.
DOI: https://doi.org/10.1042/BST20221042
Published: 09 December 2022
View article titled, Exploring craniofacial and dental development with microRNAs
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Articles

The remodeling of Z-DNA in the mammalian germ line

Yingying Meng, Piroska E. Szabó
Journal: Biochemical Society Transactions
Biochem Soc Trans (2022) 50 (6): 1875–1884.
DOI: https://doi.org/10.1042/BST20221015
Published: 01 December 2022
View article titled, The remodeling of Z-DNA in the mammalian germ line
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Articles

Transcriptional plasticity of fibroblasts in heart disease

Rudi Micheletti, Michael Alexanian
Journal: Biochemical Society Transactions
Biochem Soc Trans (2022) 50 (5): 1247–1255.
DOI: https://doi.org/10.1042/BST20210864
Published: 25 October 2022
View article titled, Transcriptional plasticity of fibroblasts in heart disease
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Articles

Small regulatory RNAs in rice epigenetic regulation

So Young Park, Jungnam Cho, Dong-Hoon Jeong
Journal: Biochemical Society Transactions
Biochem Soc Trans (2022) 50 (3): 1215–1225.
DOI: https://doi.org/10.1042/BST20210336
Published: 17 May 2022
View article titled, Small regulatory RNAs in rice epigenetic regulation
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Articles

Encyclopaedia of eukaryotic DNA methylation: from patterns to mechanisms and functions

Peter Sarkies
Journal: Biochemical Society Transactions
Biochem Soc Trans (2022) 50 (3): 1179–1190.
DOI: https://doi.org/10.1042/BST20210725
Published: 06 May 2022
View article titled, Encyclopaedia of eukaryotic DNA methylation: from patterns to mechanisms and functions
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Articles

Mitotic drive in asymmetric epigenetic inheritance

Rajesh Ranjan, Xin Chen
Journal: Biochemical Society Transactions
Biochem Soc Trans (2022) 50 (2): 675–688.
DOI: https://doi.org/10.1042/BST20200267
Published: 19 April 2022
View article titled, Mitotic drive in asymmetric epigenetic inheritance
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Articles

To be or not be (in the LAD): emerging roles of lamin proteins in transcriptional regulation

Ezequiel Nazer
Journal: Biochemical Society Transactions
Biochem Soc Trans (2022) 50 (2): 1035–1044.
DOI: https://doi.org/10.1042/BST20210858
Published: 19 April 2022
View article titled, To be or not be (in the LAD): emerging roles of lamin proteins in transcriptional regulation
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Articles

Emerging roles of lncRNAs in the pathogenesis, diagnosis, and treatment of trigeminal neuralgia

Tianyi Wang, Liu Liu, Dongzhe Song, Dingming Huang
Journal: Biochemical Society Transactions
Biochem Soc Trans (2022) 50 (2): 1013–1023.
DOI: https://doi.org/10.1042/BST20220070
Published: 19 April 2022
View article titled, Emerging roles of lncRNAs in the pathogenesis, diagnosis, and treatment of trigeminal neuralgia
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Articles

Acidic patch histone mutations and their effects on nucleosome remodeling

Hai T. Dao, Linh T. D. Pham
Journal: Biochemical Society Transactions
Biochem Soc Trans (2022) 50 (2): 907–919.
DOI: https://doi.org/10.1042/BST20210773
Published: 31 March 2022
View article titled, Acidic patch histone mutations and their effects on nucleosome remodeling
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Articles

Epigenetic regulation of human non-coding RNA gene transcription

Marco Morselli, Giorgio Dieci
Journal: Biochemical Society Transactions
Biochem Soc Trans (2022) 50 (2): 723–736.
DOI: https://doi.org/10.1042/BST20210860
Published: 14 March 2022
View article titled, Epigenetic regulation of human non-coding RNA gene transcription
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Articles

Decoding the sorghum methylome: understanding epigenetic contributions to agronomic traits

Ulduz Vafadarshamasbi, Emma Mace, David Jordan, Peter A. Crisp
Journal: Biochemical Society Transactions
Biochem Soc Trans (2022) 50 (1): 583–596.
DOI: https://doi.org/10.1042/BST20210908
Published: 25 February 2022
View article titled, Decoding the sorghum methylome: understanding epigenetic contributions to agronomic traits
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Articles

Whole-genome methods to define DNA and histone accessibility and long-range interactions in chromatin

Luke T. Marr, Prasoon Jaya, Laxmi N. Mishra, Jeffrey J. Hayes
Journal: Biochemical Society Transactions
Biochem Soc Trans (2022) 50 (1): 199–212.
DOI: https://doi.org/10.1042/BST20210959
Published: 15 February 2022
View article titled, Whole-genome methods to define DNA and histone accessibility and long-range interactions in chromatin
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Articles

Multiple roles of Pol epsilon in eukaryotic chromosome replication

Milos A. Cvetkovic, Esther Ortega, Roberto Bellelli, Alessandro Costa
Journal: Biochemical Society Transactions
Biochem Soc Trans (2022) 50 (1): 309–320.
DOI: https://doi.org/10.1042/BST20210082
Published: 07 February 2022
View article titled, Multiple roles of Pol epsilon in eukaryotic chromosome replication
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Articles

Epigenetic mechanisms in paediatric brain tumours: regulators lose control

Sara Badodi, Silvia Marino
Journal: Biochemical Society Transactions
Biochem Soc Trans (2022) 50 (1): 167–185.
DOI: https://doi.org/10.1042/BST20201227
Published: 25 January 2022
View article titled, Epigenetic mechanisms in paediatric brain tumours: regulators lose control
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Articles

Role of macronutrient intake in the epigenetics of obesity

Priyadarshni Patel, Jeganathan Ramesh Babu, Xu Wang, Thangiah Geetha
Journal: Biochemical Society Transactions
Biochem Soc Trans (2022) 50 (1): 487–497.
DOI: https://doi.org/10.1042/BST20211069
Published: 07 January 2022
View article titled, Role of macronutrient intake in the epigenetics of obesity
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Articles

Regulatory long non-coding RNAs in root growth and development

Thomas Roulé, Martin Crespi, Thomas Blein
Journal: Biochemical Society Transactions
Biochem Soc Trans (2022) 50 (1): 403–412.
DOI: https://doi.org/10.1042/BST20210743
Published: 23 December 2021
View article titled, Regulatory long non-coding RNAs in root growth and development
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Articles

The tandem repeat modules of Xist lncRNA: a swiss army knife for the control of X-chromosome inactivation

Ana Cláudia Raposo, Miguel Casanova, Anne-Valerie Gendrel, Simão Teixeira da Rocha
Journal: Biochemical Society Transactions
Biochem Soc Trans (2021) 49 (6): 2549–2560.
DOI: https://doi.org/10.1042/BST20210253
Published: 09 December 2021
View article titled, The tandem repeat modules of Xist lncRNA: a swiss army knife for the control of X-chromosome inactivation
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Articles

The role of chromatin at transcription-replication conflicts as a genome safeguard

Aleix Bayona-Feliu, Andrés Aguilera
Journal: Biochemical Society Transactions
Biochem Soc Trans (2021) 49 (6): 2727–2736.
DOI: https://doi.org/10.1042/BST20210691
Published: 25 November 2021
View article titled, The role of chromatin at transcription-replication conflicts as a genome safeguard
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Articles

X-chromosome reactivation: a concise review

Alessandra Spaziano, Irene Cantone
Journal: Biochemical Society Transactions
Biochem Soc Trans (2021) 49 (6): 2797–2805.
DOI: https://doi.org/10.1042/BST20210777
Published: 25 November 2021
View article titled, X-chromosome reactivation: a concise review
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Articles

Structural insights into the interactions of Polycomb Repressive Complex 2 with chromatin

Akhil Gargey Iragavarapu, Liqi Yao, Vignesh Kasinath
Journal: Biochemical Society Transactions
Biochem Soc Trans (2021) 49 (6): 2639–2653.
DOI: https://doi.org/10.1042/BST20210450
Published: 08 November 2021
View article titled, Structural insights into the interactions of Polycomb Repressive Complex 2 with chromatin
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Articles

Chemical biology approaches to study histone interactors

Antony J. Burton, Ghaith M. Hamza, Andrew X. Zhang, Tom W. Muir
Journal: Biochemical Society Transactions
Biochem Soc Trans (2021) 49 (5): 2431–2441.
DOI: https://doi.org/10.1042/BST20210772
Published: 28 October 2021
View article titled, Chemical biology approaches to study histone interactors
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Articles

To export, or not to export: how nuclear export factor variants resolve Piwi's dilemma

Sheng Wang, Xiaohua Lu, Ding Qiu, Yang Yu
Journal: Biochemical Society Transactions
Biochem Soc Trans (2021) 49 (5): 2073–2079.
DOI: https://doi.org/10.1042/BST20201171
Published: 13 October 2021
View article titled, To export, or not to export: how nuclear export factor variants resolve Piwi's dilemma
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Articles

The role of long non-coding RNAs in the regulation of pancreatic beta cell identity

Maya E. Wilson, Timothy J. Pullen
Journal: Biochemical Society Transactions
Biochem Soc Trans (2021) 49 (5): 2153–2161.
DOI: https://doi.org/10.1042/BST20210207
Published: 28 September 2021
View article titled, The role of long non-coding RNAs in the regulation of pancreatic beta cell identity
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Articles

Regulation of retrotransposition in Arabidopsis

Seung Cho Lee, Robert A. Martienssen
Journal: Biochemical Society Transactions
Biochem Soc Trans (2021) 49 (5): 2241–2251.
DOI: https://doi.org/10.1042/BST20210337
Published: 08 September 2021
View article titled, Regulation of retrotransposition in Arabidopsis
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Articles

Mechanisms of vascular smooth muscle cell investment and phenotypic diversification in vascular diseases

Matthew D. Worssam, Helle F. Jørgensen
Journal: Biochemical Society Transactions
Biochem Soc Trans (2021) 49 (5): 2101–2111.
DOI: https://doi.org/10.1042/BST20210138
Published: 08 September 2021
View article titled, Mechanisms of vascular smooth muscle cell investment and phenotypic diversification in vascular diseases
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Articles

The BAF chromatin remodeling complexes: structure, function, and synthetic lethalities

Julia Varga, Marie Kube, Katja Luck, Sandra Schick
Journal: Biochemical Society Transactions
Biochem Soc Trans (2021) 49 (4): 1489–1503.
DOI: https://doi.org/10.1042/BST20190960
Published: 25 August 2021
View article titled, The BAF chromatin remodeling complexes: structure, function, and synthetic lethalities
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Includes: Supplementary data
Articles

Exploring chromatin structural roles of non-coding RNAs at imprinted domains

David Llères, Yui Imaizumi, Robert Feil
Journal: Biochemical Society Transactions
Biochem Soc Trans (2021) 49 (4): 1867–1879.
DOI: https://doi.org/10.1042/BST20210758
Published: 02 August 2021
View article titled, Exploring chromatin structural roles of non-coding RNAs at imprinted domains
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Articles

Sequence determinants, function, and evolution of CpG islands

Allegra Angeloni, Ozren Bogdanovic
Journal: Biochemical Society Transactions
Biochem Soc Trans (2021) 49 (3): 1109–1119.
DOI: https://doi.org/10.1042/BST20200695
Published: 22 June 2021
View article titled, Sequence determinants, function, and evolution of CpG islands
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Articles

The MLL3/4 H3K4 methyltransferase complex in establishing an active enhancer landscape

Lan-Hsin Wang, Marvin Angelo E. Aberin, Sean Wu, Shu-Ping Wang
Journal: Biochemical Society Transactions
Biochem Soc Trans (2021) 49 (3): 1041–1054.
DOI: https://doi.org/10.1042/BST20191164
Published: 22 June 2021
View article titled, The MLL3/4 H3K4 methyltransferase complex in establishing an active enhancer landscape
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Articles

DNA methylation: from model plants to vegetable crops

Wen-Feng Nie
Journal: Biochemical Society Transactions
Biochem Soc Trans (2021) 49 (3): 1479–1487.
DOI: https://doi.org/10.1042/BST20210353
Published: 01 June 2021
View article titled, DNA methylation: from model plants to vegetable crops
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Articles

Not just a writer: PRC2 as a chromatin reader

Michael Uckelmann, Chen Davidovich
Journal: Biochemical Society Transactions
Biochem Soc Trans (2021) 49 (3): 1159–1170.
DOI: https://doi.org/10.1042/BST20200728
Published: 01 June 2021
View article titled, Not just a writer: PRC2 as a chromatin reader
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Articles

Heterochromatin and Polycomb as regulators of haematopoiesis

Christine R. Keenan
Journal: Biochemical Society Transactions
Biochem Soc Trans (2021) 49 (2): 805–814.
DOI: https://doi.org/10.1042/BST20200737
Published: 30 April 2021
View article titled, Heterochromatin and Polycomb as regulators of haematopoiesis
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Articles

Allosteric regulation of histone lysine methyltransferases: from context-specific regulation to selective drugs

Chen Davidovich, Qi Zhang
Journal: Biochemical Society Transactions
Biochem Soc Trans (2021) 49 (2): 591–607.
DOI: https://doi.org/10.1042/BST20200238
Published: 26 March 2021
View article titled, Allosteric regulation of histone lysine methyltransferases: from context-specific regulation to selective drugs
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Articles

Nutrient regulation of the flow of genetic information by O-GlcNAcylation

Yi Zhu, Gerald W. Hart
Journal: Biochemical Society Transactions
Biochem Soc Trans (2021) 49 (2): 867–880.
DOI: https://doi.org/10.1042/BST20200769
Published: 26 March 2021
View article titled, Nutrient regulation of the flow of genetic information by O-GlcNAcylation
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Articles

Diverse roles of microRNA-145 in regulating smooth muscle (dys)function in health and disease

Kirsten Riches-Suman
Journal: Biochemical Society Transactions
Biochem Soc Trans (2021) 49 (1): 353–363.
DOI: https://doi.org/10.1042/BST20200679
Published: 22 February 2021
View article titled, Diverse roles of microRNA-145 in regulating smooth muscle (dys)function in health and disease
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Articles

Using computational modelling to reveal mechanisms of epigenetic Polycomb control

Cecilia Lövkvist, Martin Howard
Journal: Biochemical Society Transactions
Biochem Soc Trans (2021) 49 (1): 71–77.
DOI: https://doi.org/10.1042/BST20190955
Published: 22 February 2021
View article titled, Using computational modelling to reveal mechanisms of epigenetic Polycomb control
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Articles

Mechanistic insights into KDM4A driven genomic instability

Nicolas L. Young, Ruhee Dere
Journal: Biochemical Society Transactions
Biochem Soc Trans (2021) 49 (1): 93–105.
DOI: https://doi.org/10.1042/BST20191219
Published: 25 January 2021
View article titled, Mechanistic insights into KDM4A driven genomic instability
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Articles

Keeping your options open: insights from Dppa2/4 into how epigenetic priming factors promote cell plasticity

Mélanie A. Eckersley-Maslin
Journal: Biochemical Society Transactions
Biochem Soc Trans (2020) 48 (6): 2891–2902.
DOI: https://doi.org/10.1042/BST20200873
Published: 18 December 2020
View article titled, Keeping your options open: insights from Dppa2/4 into how epigenetic priming factors promote cell plasticity
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Articles

RNA matchmaking in chromatin regulation

Stephen K. Wu, Justin T. Roberts, Maggie M. Balas, Aaron M. Johnson
Journal: Biochemical Society Transactions
Biochem Soc Trans (2020) 48 (6): 2467–2481.
DOI: https://doi.org/10.1042/BST20191225
Published: 27 November 2020
View article titled, RNA matchmaking in chromatin regulation
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Articles

The complexity of PRC2 catalysts CLF and SWN in plants

Jie Shu, Chen Chen, Chenlong Li, Yuhai Cui
Journal: Biochemical Society Transactions
Biochem Soc Trans (2020) 48 (6): 2779–2789.
DOI: https://doi.org/10.1042/BST20200660
Published: 10 November 2020
View article titled, The complexity of PRC2 catalysts CLF and SWN in plants
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Articles

Architectural RNA in chromatin organization

Jitendra Thakur, Steven Henikoff
Journal: Biochemical Society Transactions
Biochem Soc Trans (2020) 48 (5): 1967–1978.
DOI: https://doi.org/10.1042/BST20191226
Published: 08 September 2020
View article titled, Architectural RNA in chromatin organization
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Articles

Epigenetic plasticity, selection, and tumorigenesis

William A. Flavahan
Journal: Biochemical Society Transactions
Biochem Soc Trans (2020) 48 (4): 1609–1621.
DOI: https://doi.org/10.1042/BST20191215
Published: 14 August 2020
View article titled, Epigenetic plasticity, selection, and tumorigenesis
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Articles

Relating SMCHD1 structure to its function in epigenetic silencing

In Collection
Protein structure and function
Alexandra D. Gurzau, Marnie E. Blewitt, Peter E. Czabotar, James M. Murphy, Richard W. Birkinshaw
Journal: Biochemical Society Transactions
Biochem Soc Trans (2020) 48 (4): 1751–1763.
DOI: https://doi.org/10.1042/BST20200242
Published: 11 August 2020
View article titled, Relating SMCHD1 structure to its function in epigenetic silencing
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Articles

Current understanding of plant Polycomb group proteins and the repressive histone H3 Lysine 27 trimethylation

Huijun Jiao, Yuanyuan Xie, Zicong Li
Journal: Biochemical Society Transactions
Biochem Soc Trans (2020) 48 (4): 1697–1706.
DOI: https://doi.org/10.1042/BST20200192
Published: 29 July 2020
View article titled, Current understanding of plant Polycomb group proteins and the repressive histone H3 Lysine 27 trimethylation
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Articles

How do histone modifications contribute to transgenerational epigenetic inheritance in C. elegans ?

In Collection
Embryonic development
Rachel M. Woodhouse, Alyson Ashe
Journal: Biochemical Society Transactions
Biochem Soc Trans (2020) 48 (3): 1019–1034.
DOI: https://doi.org/10.1042/BST20190944
Published: 15 June 2020
View article titled, How do histone modifications contribute to transgenerational epigenetic inheritance in C. elegans ?
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