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Articles

Myosin in chromosome organisation and gene expression

Isabel W. Shahid-Fuente, Christopher P. Toseland
Journal: Biochemical Society Transactions
Biochem Soc Trans (2023) BST20220939.
DOI: https://doi.org/10.1042/BST20220939
Published: 12 May 2023
View article titled, Myosin in chromosome organisation and gene expression
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Articles

Studying histone inheritance in different systems using imaging-based methods and perspectives

Emily Zion, Xin Chen
Journal: Biochemical Society Transactions
Biochem Soc Trans (2023) BST20220983.
DOI: https://doi.org/10.1042/BST20220983
Published: 12 May 2023
View article titled, Studying histone inheritance in different systems using imaging-based methods and perspectives
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Articles

The function and regulation of ADP-ribosylation in the DNA damage response

Lena Duma, Ivan Ahel
Journal: Biochemical Society Transactions
Biochem Soc Trans (2023) BST20220749.
DOI: https://doi.org/10.1042/BST20220749
Published: 12 May 2023
View article titled, The function and regulation of ADP-ribosylation in the DNA damage response
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Articles

The assembly of the MCM2–7 hetero-hexamer and its significance in DNA replication

Yuki Hatoyama, Masato T. Kanemaki
Journal: Biochemical Society Transactions
Biochem Soc Trans (2023) BST20221465.
DOI: https://doi.org/10.1042/BST20221465
Published: 05 May 2023
View article titled, The assembly of the MCM2–7 hetero-hexamer and its significance in DNA replication
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Articles

The regulation of meiotic crossover distribution: a coarse solution to a century-old mystery?

Chloe Girard, David Zwicker, Raphael Mercier
Journal: Biochemical Society Transactions
Biochem Soc Trans (2023) BST20221329.
DOI: https://doi.org/10.1042/BST20221329
Published: 05 May 2023
View article titled, The regulation of meiotic crossover distribution: a coarse solution to a century-old mystery?
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Includes: Multimedia, Supplementary data
Articles

Mre11–Rad50: the DNA end game

Karl-Peter Hopfner
Journal: Biochemical Society Transactions
Biochem Soc Trans (2023) 51 (2): 527–538.
DOI: https://doi.org/10.1042/BST20220754
Published: 09 March 2023
View article titled, Mre11–Rad50: the DNA end game
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Articles

Structural insights on the KMT2–NCP interaction

Zi Yang, Robert Zepeda, Yali Dou
Journal: Biochemical Society Transactions
Biochem Soc Trans (2023) 51 (1): 427–434.
DOI: https://doi.org/10.1042/BST20221155
Published: 25 January 2023
View article titled, Structural insights on the KMT2–NCP interaction
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Articles

G4-interacting proteins endangering genomic stability at G4 DNA-forming sites

Nayun Kim
Journal: Biochemical Society Transactions
Biochem Soc Trans (2023) 51 (1): 403–413.
DOI: https://doi.org/10.1042/BST20221018
Published: 11 January 2023
View article titled, G4-interacting proteins endangering genomic stability at G4 DNA-forming sites
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Articles

Form and function of archaeal genomes

Stephen D. Bell
Journal: Biochemical Society Transactions
Biochem Soc Trans (2022) 50 (6): 1931–1939.
DOI: https://doi.org/10.1042/BST20221396
Published: 13 December 2022
View article titled, Form and function of archaeal genomes
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Articles

The influence of high-order chromatin state in the regulation of stem cell fate

Xinpeng Chen, Haiyan Lin, Guohong Li
Journal: Biochemical Society Transactions
Biochem Soc Trans (2022) 50 (6): 1809–1822.
DOI: https://doi.org/10.1042/BST20220763
Published: 09 December 2022
View article titled, The influence of high-order chromatin state in the regulation of stem cell fate
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Articles

The remodeling of Z-DNA in the mammalian germ line

Yingying Meng, Piroska E. Szabó
Journal: Biochemical Society Transactions
Biochem Soc Trans (2022) 50 (6): 1875–1884.
DOI: https://doi.org/10.1042/BST20221015
Published: 01 December 2022
View article titled, The remodeling of Z-DNA in the mammalian germ line
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Articles

Extrachromosomal DNA (ecDNA): an origin of tumor heterogeneity, genomic remodeling, and drug resistance

Lauren T. Pecorino, Roel G.W. Verhaak, Anton Henssen, Paul S. Mischel
Journal: Biochemical Society Transactions
Biochem Soc Trans (2022) 50 (6): 1911–1920.
DOI: https://doi.org/10.1042/BST20221045
Published: 10 November 2022
View article titled, Extrachromosomal DNA (ecDNA): an origin of tumor heterogeneity, genomic remodeling, and drug resistance
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Articles

Unveiling dynamic enhancer–promoter interactions in Drosophila melanogaster

Hao Deng, Gaochen Jin, Bomyi Lim
Journal: Biochemical Society Transactions
Biochem Soc Trans (2022) 50 (6): 1633–1642.
DOI: https://doi.org/10.1042/BST20220325
Published: 09 November 2022
View article titled, Unveiling dynamic enhancer–promoter interactions in Drosophila melanogaster
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Articles

Regulation of ATR–CHK1 signaling by ubiquitination of CLASPIN

Xuefei Zhu, Xiang-Yang Zheng, Peng Gong, Xingzhi Xu
Journal: Biochemical Society Transactions
Biochem Soc Trans (2022) 50 (5): 1471–1480.
DOI: https://doi.org/10.1042/BST20220729
Published: 05 October 2022
View article titled, Regulation of ATR–CHK1 signaling by ubiquitination of CLASPIN
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Articles

Processing DNA lesions during mitosis to prevent genomic instability

Anastasia Audrey, Lauren de Haan, Marcel A.T.M. van Vugt, H. Rudolf de Boer
Journal: Biochemical Society Transactions
Biochem Soc Trans (2022) 50 (4): 1105–1118.
DOI: https://doi.org/10.1042/BST20220049
Published: 30 August 2022
View article titled, Processing DNA lesions during mitosis to prevent genomic instability
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Articles

Revisiting PARP2 and PARP1 trapping through quantitative live-cell imaging

Hanwen Zhang, Xiaohui Lin, Shan Zha
Journal: Biochemical Society Transactions
Biochem Soc Trans (2022) 50 (4): 1169–1177.
DOI: https://doi.org/10.1042/BST20220366
Published: 12 August 2022
View article titled, Revisiting PARP2 and PARP1 trapping through quantitative live-cell imaging
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Articles

Unravelling mechanisms that govern meiotic crossover formation in wheat

James D. Higgins, Kim Osman, Stuart D. Desjardins, Ian R. Henderson, Keith J. Edwards, F. Chris H. Franklin
Journal: Biochemical Society Transactions
Biochem Soc Trans (2022) 50 (4): 1179–1186.
DOI: https://doi.org/10.1042/BST20220405
Published: 28 July 2022
View article titled, Unravelling mechanisms that govern meiotic crossover formation in wheat
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Articles

Role of SWI/SNF chromatin remodeling genes in lung cancer development

Beatriz Monterde, Ignacio Varela
Journal: Biochemical Society Transactions
Biochem Soc Trans (2022) 50 (3): 1143–1150.
DOI: https://doi.org/10.1042/BST20211084
Published: 19 May 2022
View article titled, Role of SWI/SNF chromatin remodeling genes in lung cancer development
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Articles

Encyclopaedia of eukaryotic DNA methylation: from patterns to mechanisms and functions

Peter Sarkies
Journal: Biochemical Society Transactions
Biochem Soc Trans (2022) 50 (3): 1179–1190.
DOI: https://doi.org/10.1042/BST20210725
Published: 06 May 2022
View article titled, Encyclopaedia of eukaryotic DNA methylation: from patterns to mechanisms and functions
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Articles

To be or not be (in the LAD): emerging roles of lamin proteins in transcriptional regulation

Ezequiel Nazer
Journal: Biochemical Society Transactions
Biochem Soc Trans (2022) 50 (2): 1035–1044.
DOI: https://doi.org/10.1042/BST20210858
Published: 19 April 2022
View article titled, To be or not be (in the LAD): emerging roles of lamin proteins in transcriptional regulation
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Articles

Epigenetic regulation of human non-coding RNA gene transcription

Marco Morselli, Giorgio Dieci
Journal: Biochemical Society Transactions
Biochem Soc Trans (2022) 50 (2): 723–736.
DOI: https://doi.org/10.1042/BST20210860
Published: 14 March 2022
View article titled, Epigenetic regulation of human non-coding RNA gene transcription
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Articles

The intricate roles of RCC1 in normal cells and cancer cells

Li Jing, Hang Fai Kwok
Journal: Biochemical Society Transactions
Biochem Soc Trans (2022) 50 (1): 83–93.
DOI: https://doi.org/10.1042/BST20210861
Published: 22 February 2022
View article titled, The intricate roles of RCC1 in normal cells and cancer cells
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Articles

Whole-genome methods to define DNA and histone accessibility and long-range interactions in chromatin

Luke T. Marr, Prasoon Jaya, Laxmi N. Mishra, Jeffrey J. Hayes
Journal: Biochemical Society Transactions
Biochem Soc Trans (2022) 50 (1): 199–212.
DOI: https://doi.org/10.1042/BST20210959
Published: 15 February 2022
View article titled, Whole-genome methods to define DNA and histone accessibility and long-range interactions in chromatin
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Articles

Multiple roles of Pol epsilon in eukaryotic chromosome replication

Milos A. Cvetkovic, Esther Ortega, Roberto Bellelli, Alessandro Costa
Journal: Biochemical Society Transactions
Biochem Soc Trans (2022) 50 (1): 309–320.
DOI: https://doi.org/10.1042/BST20210082
Published: 07 February 2022
View article titled, Multiple roles of Pol epsilon in eukaryotic chromosome replication
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Articles

Mechanism of action of nucleotide excision repair machinery

Areetha D'Souza, Alexandra M. Blee, Walter J. Chazin
Journal: Biochemical Society Transactions
Biochem Soc Trans (2022) 50 (1): 375–386.
DOI: https://doi.org/10.1042/BST20210246
Published: 25 January 2022
View article titled, Mechanism of action of nucleotide excision repair machinery
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Articles

Isocitrate dehydrogenase gene variants in cancer and their clinical significance

Thomas Cadoux-Hudson, Christopher J. Schofield, James S.O. McCullagh
Journal: Biochemical Society Transactions
Biochem Soc Trans (2021) 49 (6): 2561–2572.
DOI: https://doi.org/10.1042/BST20210277
Published: 02 December 2021
View article titled, Isocitrate dehydrogenase gene variants in cancer and their clinical significance
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Articles

The role of chromatin at transcription-replication conflicts as a genome safeguard

Aleix Bayona-Feliu, Andrés Aguilera
Journal: Biochemical Society Transactions
Biochem Soc Trans (2021) 49 (6): 2727–2736.
DOI: https://doi.org/10.1042/BST20210691
Published: 25 November 2021
View article titled, The role of chromatin at transcription-replication conflicts as a genome safeguard
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Articles

X-chromosome reactivation: a concise review

Alessandra Spaziano, Irene Cantone
Journal: Biochemical Society Transactions
Biochem Soc Trans (2021) 49 (6): 2797–2805.
DOI: https://doi.org/10.1042/BST20210777
Published: 25 November 2021
View article titled, X-chromosome reactivation: a concise review
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Articles

Chromosome clustering in mitosis by the nuclear protein Ki-67

Konstantinos Stamatiou, Paola Vagnarelli
Journal: Biochemical Society Transactions
Biochem Soc Trans (2021) 49 (6): 2767–2776.
DOI: https://doi.org/10.1042/BST20210717
Published: 16 November 2021
View article titled, Chromosome clustering in mitosis by the nuclear protein Ki-67
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Articles

TOP2B's contributions to transcription

Caroline A. Austin, Ian G. Cowell, Mushtaq M. Khazeem, Dawn Lok, Huei Teng Ng
Journal: Biochemical Society Transactions
Biochem Soc Trans (2021) 49 (6): 2483–2493.
DOI: https://doi.org/10.1042/BST20200454
Published: 08 November 2021
View article titled, TOP2B's contributions to transcription
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Articles

Programmed DNA elimination: silencing genes and repetitive sequences in somatic cells

Maxim V. Zagoskin, Jianbin Wang
Journal: Biochemical Society Transactions
Biochem Soc Trans (2021) 49 (5): 1891–1903.
DOI: https://doi.org/10.1042/BST20190951
Published: 19 October 2021
View article titled, Programmed DNA elimination: silencing genes and repetitive sequences in somatic cells
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Articles

Efficiency and equity in origin licensing to ensure complete DNA replication

Liu Mei, Jeanette Gowen Cook
Journal: Biochemical Society Transactions
Biochem Soc Trans (2021) 49 (5): 2133–2141.
DOI: https://doi.org/10.1042/BST20210161
Published: 21 September 2021
View article titled, Efficiency and equity in origin licensing to ensure complete DNA replication
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Articles

Exploring chromatin structural roles of non-coding RNAs at imprinted domains

David Llères, Yui Imaizumi, Robert Feil
Journal: Biochemical Society Transactions
Biochem Soc Trans (2021) 49 (4): 1867–1879.
DOI: https://doi.org/10.1042/BST20210758
Published: 02 August 2021
View article titled, Exploring chromatin structural roles of non-coding RNAs at imprinted domains
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Articles

Polymer models are a versatile tool to study chromatin 3D organization

Andrea Esposito, Simona Bianco, Luca Fiorillo, Mattia Conte, Alex Abraham, Francesco Musella, Mario Nicodemi, Antonella Prisco, Andrea M. Chiariello
Journal: Biochemical Society Transactions
Biochem Soc Trans (2021) 49 (4): 1675–1684.
DOI: https://doi.org/10.1042/BST20201004
Published: 20 July 2021
View article titled, Polymer models are a versatile tool to study chromatin 3D organization
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Articles

DNA methylation: from model plants to vegetable crops

Wen-Feng Nie
Journal: Biochemical Society Transactions
Biochem Soc Trans (2021) 49 (3): 1479–1487.
DOI: https://doi.org/10.1042/BST20210353
Published: 01 June 2021
View article titled, DNA methylation: from model plants to vegetable crops
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Articles

New insights into promoter–enhancer communication mechanisms revealed by dynamic single-molecule imaging

Jieru Li, Alexandros Pertsinidis
Journal: Biochemical Society Transactions
Biochem Soc Trans (2021) 49 (3): 1299–1309.
DOI: https://doi.org/10.1042/BST20200963
Published: 01 June 2021
View article titled, New insights into promoter–enhancer communication mechanisms revealed by dynamic single-molecule imaging
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Articles

Not just a writer: PRC2 as a chromatin reader

Michael Uckelmann, Chen Davidovich
Journal: Biochemical Society Transactions
Biochem Soc Trans (2021) 49 (3): 1159–1170.
DOI: https://doi.org/10.1042/BST20200728
Published: 01 June 2021
View article titled, Not just a writer: PRC2 as a chromatin reader
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Articles

The needle and the haystack: single molecule tracking to probe the transcription factor search in eukaryotes

Matteo Mazzocca, Tom Fillot, Alessia Loffreda, Daniela Gnani, Davide Mazza
Journal: Biochemical Society Transactions
Biochem Soc Trans (2021) 49 (3): 1121–1132.
DOI: https://doi.org/10.1042/BST20200709
Published: 18 May 2021
View article titled, The needle and the haystack: single molecule tracking to probe the transcription factor search in eukaryotes
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Articles

Primary cilia and the DNA damage response: linking a cellular antenna and nuclear signals

Ciaran G. Morrison
Journal: Biochemical Society Transactions
Biochem Soc Trans (2021) 49 (2): 829–841.
DOI: https://doi.org/10.1042/BST20200751
Published: 12 April 2021
View article titled, Primary cilia and the DNA damage response: linking a cellular antenna and nuclear signals
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Articles

The regulation of the DNA damage response at telomeres: focus on kinases

Michela Galli, Chiara Frigerio, Maria Pia Longhese, Michela Clerici
Journal: Biochemical Society Transactions
Biochem Soc Trans (2021) 49 (2): 933–943.
DOI: https://doi.org/10.1042/BST20200856
Published: 26 March 2021
View article titled, The regulation of the DNA damage response at telomeres: focus on kinases
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Articles

Nutrient regulation of the flow of genetic information by O-GlcNAcylation

Yi Zhu, Gerald W. Hart
Journal: Biochemical Society Transactions
Biochem Soc Trans (2021) 49 (2): 867–880.
DOI: https://doi.org/10.1042/BST20200769
Published: 26 March 2021
View article titled, Nutrient regulation of the flow of genetic information by O-GlcNAcylation
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Articles

Pushing the super-resolution limit: recent improvements in microscopy below the diffraction limit

D. J. Nieves, M. A. B. Baker
Journal: Biochemical Society Transactions
Biochem Soc Trans (2021) 49 (1): 431–439.
DOI: https://doi.org/10.1042/BST20200746
Published: 18 February 2021
View article titled, Pushing the super-resolution limit: recent improvements in microscopy below the diffraction limit
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Articles

Aneuploidy in human eggs: contributions of the meiotic spindle

In Collection
Awards
Christopher Thomas, Tommaso Cavazza, Melina Schuh
Journal: Biochemical Society Transactions
Biochem Soc Trans (2021) 49 (1): 107–118.
DOI: https://doi.org/10.1042/BST20200043
Published: 15 January 2021
View article titled, Aneuploidy in human eggs: contributions of the meiotic spindle
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Articles

Anatomy of a twin DNA replication factory

Huilin Li, Nina Y. Yao, Michael E. O'Donnell
Journal: Biochemical Society Transactions
Biochem Soc Trans (2020) 48 (6): 2769–2778.
DOI: https://doi.org/10.1042/BST20200640
Published: 10 December 2020
View article titled, Anatomy of a twin DNA replication factory
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Articles

Nuclear import of histones

Natalia Elisa Bernardes, Yuh Min Chook
Journal: Biochemical Society Transactions
Biochem Soc Trans (2020) 48 (6): 2753–2767.
DOI: https://doi.org/10.1042/BST20200572
Published: 10 December 2020
View article titled, Nuclear import of histones
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Articles

Turning the Mre11/Rad50 DNA repair complex on its head: lessons from SMC protein hinges, dynamic coiled-coil movements and DNA loop-extrusion?

Ekaterina Zabolotnaya, Ioanna Mela, Robert M. Henderson, Nicholas P. Robinson
Journal: Biochemical Society Transactions
Biochem Soc Trans (2020) 48 (6): 2359–2376.
DOI: https://doi.org/10.1042/BST20170168
Published: 10 December 2020
View article titled, Turning the Mre11/Rad50 DNA repair complex on its head: lessons from SMC protein hinges, dynamic coiled-coil movements and DNA loop-extrusion?
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Articles

RNA matchmaking in chromatin regulation

Stephen K. Wu, Justin T. Roberts, Maggie M. Balas, Aaron M. Johnson
Journal: Biochemical Society Transactions
Biochem Soc Trans (2020) 48 (6): 2467–2481.
DOI: https://doi.org/10.1042/BST20191225
Published: 27 November 2020
View article titled, RNA matchmaking in chromatin regulation
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Articles

‘PIPs’ in DNA polymerase: PCNA interaction affairs

Narottam Acharya, Shraddheya Kumar Patel, Satya Ranjan Sahu, Premlata Kumari
Journal: Biochemical Society Transactions
Biochem Soc Trans (2020) 48 (6): 2811–2822.
DOI: https://doi.org/10.1042/BST20200678
Published: 16 November 2020
View article titled, ‘PIPs’ in DNA polymerase: PCNA interaction affairs
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Articles

Emerging roles of lamins and DNA damage repair mechanisms in ovarian cancer

Duhita Sengupta, Asima Mukhopadhyay, Kaushik Sengupta
Journal: Biochemical Society Transactions
Biochem Soc Trans (2020) 48 (5): 2317–2333.
DOI: https://doi.org/10.1042/BST20200713
Published: 21 October 2020
View article titled, Emerging roles of lamins and DNA damage repair mechanisms in ovarian cancer
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Articles

Condensin complexes: understanding loop extrusion one conformational change at a time

Erin E. Cutts, Alessandro Vannini
Journal: Biochemical Society Transactions
Biochem Soc Trans (2020) 48 (5): 2089–2100.
DOI: https://doi.org/10.1042/BST20200241
Published: 02 October 2020
View article titled, Condensin complexes: understanding loop extrusion one conformational change at a time
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