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Volume 43, Issue 6

December 2015

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Table of Contents

ISSN 0300-5127

EISSN 1470-8752

In this Issue

Biochemical Society Focused Meetings

Biochemical Society Focused Meetings

Metabolic Pathways Analysis 2015

Dynamics of NAD-metabolism: everything but constant

Christiane A. Opitz; Ines Heiland

Biochem Soc Trans (2015) 43 (6): 1127–1132.

Abstract

View Articletitled, Dynamics of NAD-metabolism: everything but constant

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A reductionist approach to model photosynthetic self-regulation in eukaryotes in response to light

Anna Matuszyńska; Oliver Ebenhöh

Biochem Soc Trans (2015) 43 (6): 1133–1139.

Abstract

View Articletitled, A reductionist approach to model photosynthetic self-regulation in eukaryotes in response to light

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Manipulation of the ATP pool as a tool for metabolic engineering

Oliver Hädicke; Steffen Klamt

Biochem Soc Trans (2015) 43 (6): 1140–1145.

Abstract

View Articletitled, Manipulation of the ATP pool as a tool for metabolic engineering

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Hierarchical decomposition of metabolic networks using k-modules

Arne C. Reimers

Biochem Soc Trans (2015) 43 (6): 1146–1150.

Abstract

View Articletitled, Hierarchical decomposition of metabolic networks using k-modules

Supplementary data

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A multi-scale, multi-disciplinary approach for assessing the technological, economic and environmental performance of bio-based chemicals

Markus Herrgård; Sumesh Sukumara; Miguel Campodonico; Kai Zhuang

Biochem Soc Trans (2015) 43 (6): 1151–1156.

Abstract

View Articletitled, A multi-scale, multi-disciplinary approach for assessing the technological, economic and environmental performance of bio-based chemicals

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Quantitative analysis of drug effects at the whole-body level: a case study for glucose metabolism in malaria patients

Jacky L. Snoep; Kathleen Green; Johann Eicher; Daniel C. Palm; Gerald Penkler; Francois du Toit; Nicolas Walters; Robert Burger; Hans V. Westerhoff; David D. van Niekerk

Biochem Soc Trans (2015) 43 (6): 1157–1163.

Abstract

View Articletitled, Quantitative analysis of drug effects at the whole-body level: a case study for glucose metabolism in malaria patients

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Genome-scale modelling of microbial metabolism with temporal and spatial resolution

Michael A. Henson

Biochem Soc Trans (2015) 43 (6): 1164–1171.

Abstract

View Articletitled, Genome-scale modelling of microbial metabolism with temporal and spatial resolution

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Modelling metabolic evolution on phenotypic fitness landscapes: a case study on C₄ photosynthesis

David Heckmann

Biochem Soc Trans (2015) 43 (6): 1172–1176.

Abstract

View Articletitled, Modelling metabolic evolution on phenotypic fitness landscapes: a case study on C4 photosynthesis

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Metabolic flux prediction in cancer cells with altered substrate uptake

Jean-Marc Schwartz; Michael Barber; Zita Soons

Biochem Soc Trans (2015) 43 (6): 1177–1181.

Abstract

View Articletitled, Metabolic flux prediction in cancer cells with altered substrate uptake

Supplementary data

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Modelling metabolism of the diatom Phaeodactylum tricornutum

Dipali Singh; Ross Carlson; David Fell; Mark Poolman

Biochem Soc Trans (2015) 43 (6): 1182–1186.

Abstract

View Articletitled, Modelling metabolism of the diatom Phaeodactylum tricornutum

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Mathematical models for explaining the Warburg effect: a review focussed on ATP and biomass production

Stefan Schuster; Daniel Boley; Philip Möller; Heiko Stark; Christoph Kaleta

Biochem Soc Trans (2015) 43 (6): 1187–1194.

Abstract

View Articletitled, Mathematical models for explaining the Warburg effect: a review focussed on ATP and biomass production

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Resource allocation in metabolic networks: kinetic optimization and approximations by FBA

Stefan Müller; Georg Regensburger; Ralf Steuer

Biochem Soc Trans (2015) 43 (6): 1195–1200.

Abstract

View Articletitled, Resource allocation in metabolic networks: kinetic optimization and approximations by FBA

Supplementary data

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Translation UK 2015

T-cells require post-transcriptional regulation for accurate immune responses

Fiamma Salerno; Monika C. Wolkers

Biochem Soc Trans (2015) 43 (6): 1201–1207.

Abstract

View Articletitled, T-cells require post-transcriptional regulation for accurate immune responses

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Mechanisms of regulation of mature miRNAs

Benjamin P. Towler; Christopher I. Jones; Sarah F. Newbury

Biochem Soc Trans (2015) 43 (6): 1208–1214.

Abstract

View Articletitled, Mechanisms of regulation of mature miRNAs

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Quantifying the ‘escapers’ among RNA species

Iolanda Ferro; Zoya Ignatova

Biochem Soc Trans (2015) 43 (6): 1215–1220.

Abstract

View Articletitled, Quantifying the ‘escapers’ among RNA species

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Co-translational assembly of protein complexes

Jonathan N. Wells; L. Therese Bergendahl; Joseph A. Marsh

Biochem Soc Trans (2015) 43 (6): 1221–1226.

Abstract

View Articletitled, Co-translational assembly of protein complexes

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Translational dysregulation in cancer: eIF4A isoforms and sequence determinants of eIF4A dependence

Farheen Raza; Joseph Alexander Waldron; John Le Quesne

Biochem Soc Trans (2015) 43 (6): 1227–1233.

Abstract

View Articletitled, Translational dysregulation in cancer: eIF4A isoforms and sequence determinants of eIF4A dependence

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eIF2B: recent structural and functional insights into a key regulator of translation

Noel C. Wortham; Christopher G. Proud

Biochem Soc Trans (2015) 43 (6): 1234–1240.

Abstract

View Articletitled, eIF2B: recent structural and functional insights into a key regulator of translation

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Regulation of the expression and activity of Unr in mammalian cells

Emma C. Anderson; Pól Ó Catnaigh

Biochem Soc Trans (2015) 43 (6): 1241–1246.

Abstract

View Articletitled, Regulation of the expression and activity of Unr in mammalian cells

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Tuning innate immunity by translation

Robert Rauscher; Zoya Ignatova

Biochem Soc Trans (2015) 43 (6): 1247–1252.

Abstract

View Articletitled, Tuning innate immunity by translation

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Ccr4–Not is at the core of the eukaryotic gene expression circuitry

Zoltan Villanyi; Martine A. Collart

Biochem Soc Trans (2015) 43 (6): 1253–1258.

Abstract

View Articletitled, Ccr4–Not is at the core of the eukaryotic gene expression circuitry

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Mutation of genes controlling mRNA metabolism and protein synthesis predisposes to neurodevelopmental disorders

Francesca Sartor; Jihan Anderson; Colin McCaig; Zosia Miedzybrodzka; Berndt Müller

Biochem Soc Trans (2015) 43 (6): 1259–1265.

Abstract

View Articletitled, Mutation of genes controlling mRNA metabolism and protein synthesis predisposes to neurodevelopmental disorders

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Rate control in yeast protein synthesis at the population and single-cell levels

Estelle Dacheux; Helena Firczuk; John E.G. McCarthy

Biochem Soc Trans (2015) 43 (6): 1266–1270.

Abstract

View Articletitled, Rate control in yeast protein synthesis at the population and single-cell levels

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Ribosomal profiling adds new coding sequences to the proteome

Muhammad Ali S. Mumtaz; Juan Pablo Couso

Biochem Soc Trans (2015) 43 (6): 1271–1276.

Abstract

View Articletitled, Ribosomal profiling adds new coding sequences to the proteome

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Poly(A)-binding proteins and mRNA localization: who rules the roost?

Nicola K. Gray; Lenka Hrabálková; Jessica P. Scanlon; Richard W.P. Smith

Biochem Soc Trans (2015) 43 (6): 1277–1284.

Abstract

View Articletitled, Poly(A)-binding proteins and mRNA localization: who rules the roost?

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Modulation of the cytoplasmic functions of mammalian post-transcriptional regulatory proteins by methylation and acetylation: a key layer of regulation waiting to be uncovered?

Tajekesa K.P. Blee; Nicola K. Gray; Matthew Brook

Biochem Soc Trans (2015) 43 (6): 1285–1295.

Abstract

View Articletitled, Modulation of the cytoplasmic functions of mammalian post-transcriptional regulatory proteins by methylation and acetylation: a key layer of regulation waiting to be uncovered?

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Corrections

Correction: Molecular action of sulphonylureas on K_ATP channels: a real partnership between drugs and nucleotides

Heidi de Wet; Peter Proks

Biochem Soc Trans (2015) 43 (6): 1297.

Extract

View Articletitled, Correction: Molecular action of sulphonylureas on KATP channels: a real partnership between drugs and nucleotides

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Biochemical Society Focused Meetings

Metabolic Pathways Analysis 2015

Dynamics of NAD-metabolism: everything but constant

A reductionist approach to model photosynthetic self-regulation in eukaryotes in response to light

Manipulation of the ATP pool as a tool for metabolic engineering

Hierarchical decomposition of metabolic networks using k-modules

A multi-scale, multi-disciplinary approach for assessing the technological, economic and environmental performance of bio-based chemicals

Quantitative analysis of drug effects at the whole-body level: a case study for glucose metabolism in malaria patients

Genome-scale modelling of microbial metabolism with temporal and spatial resolution

Modelling metabolic evolution on phenotypic fitness landscapes: a case study on C₄ photosynthesis

Metabolic flux prediction in cancer cells with altered substrate uptake

Modelling metabolism of the diatom Phaeodactylum tricornutum

Mathematical models for explaining the Warburg effect: a review focussed on ATP and biomass production

Resource allocation in metabolic networks: kinetic optimization and approximations by FBA

Translation UK 2015

T-cells require post-transcriptional regulation for accurate immune responses

Mechanisms of regulation of mature miRNAs

Quantifying the ‘escapers’ among RNA species

Co-translational assembly of protein complexes

Translational dysregulation in cancer: eIF4A isoforms and sequence determinants of eIF4A dependence

eIF2B: recent structural and functional insights into a key regulator of translation

Regulation of the expression and activity of Unr in mammalian cells

Tuning innate immunity by translation

Ccr4–Not is at the core of the eukaryotic gene expression circuitry

Mutation of genes controlling mRNA metabolism and protein synthesis predisposes to neurodevelopmental disorders

Rate control in yeast protein synthesis at the population and single-cell levels

Ribosomal profiling adds new coding sequences to the proteome

Poly(A)-binding proteins and mRNA localization: who rules the roost?

Modulation of the cytoplasmic functions of mammalian post-transcriptional regulatory proteins by methylation and acetylation: a key layer of regulation waiting to be uncovered?

Corrections

Correction: Molecular action of sulphonylureas on K_ATP channels: a real partnership between drugs and nucleotides

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Biochemical Society Focused Meetings

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Corrections

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