All proteins require physical interactions with other proteins in order to perform their functions. Most of them oligomerize into homomers, and a vast majority of these homomers interact with other proteins, at least part of the time, forming transient or obligate heteromers. In the present paper, we review the structural, biophysical and evolutionary aspects of these protein interactions. We discuss how protein function and stability benefit from oligomerization, as well as evolutionary pathways by which oligomers emerge, mostly from the perspective of homomers. Finally, we emphasize the specificities of heteromeric complexes and their structure and evolution. We also discuss two analytical approaches increasingly being used to study protein structures as well as their interactions. First, we review the use of the biological networks and graph theory for analysis of protein interactions and structure. Secondly, we discuss recent advances in techniques for detecting correlated mutations, with the emphasis on their role in identifying pathways of allosteric communication.
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June 2012
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Conference Article|
May 22 2012
The emergence of protein complexes: quaternary structure, dynamics and allostery
Tina Perica;
Tina Perica
*MRC Laboratory of Molecular Biology, Hills Road, Cambridge CB2 0QH, U.K.
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Joseph A. Marsh;
Joseph A. Marsh
*MRC Laboratory of Molecular Biology, Hills Road, Cambridge CB2 0QH, U.K.
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Filipa L. Sousa;
Filipa L. Sousa
*MRC Laboratory of Molecular Biology, Hills Road, Cambridge CB2 0QH, U.K.
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Eviatar Natan;
Eviatar Natan
*MRC Laboratory of Molecular Biology, Hills Road, Cambridge CB2 0QH, U.K.
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Lucy J. Colwell;
Lucy J. Colwell
*MRC Laboratory of Molecular Biology, Hills Road, Cambridge CB2 0QH, U.K.
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Sebastian E. Ahnert;
Sebastian E. Ahnert
†Theory of Condensed Matter, Cavendish Laboratory, University of Cambridge, JJ Thomson Avenue, Cambridge CB3 0HE, U.K.
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Sarah A. Teichmann
Sarah A. Teichmann
1
*MRC Laboratory of Molecular Biology, Hills Road, Cambridge CB2 0QH, U.K.
1To whom correspondence should be addressed (emailsat@mrc-lmb.cam.ac.uk).
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Publisher: Portland Press Ltd
Received:
March 01 2012
Online ISSN: 1470-8752
Print ISSN: 0300-5127
© The Authors Journal compilation © 2012 Biochemical Society
2012
Biochem Soc Trans (2012) 40 (3): 475–491.
Article history
Received:
March 01 2012
Citation
Tina Perica, Joseph A. Marsh, Filipa L. Sousa, Eviatar Natan, Lucy J. Colwell, Sebastian E. Ahnert, Sarah A. Teichmann; The emergence of protein complexes: quaternary structure, dynamics and allostery. Biochem Soc Trans 1 June 2012; 40 (3): 475–491. doi: https://doi.org/10.1042/BST20120056
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