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Structural and functional characterisation of a stable, broad-specificity multimeric sialidase from the oral pathogen Tannerella forsythia

Marianne J Satur, Paulina Urbanowicz, Daniel R Spencer, John B Rafferty, Graham Philip Stafford

Biochem J (2022) BCJ20220244.

DOI: https://doi.org/10.1042/BCJ20220244

Published: 02 August 2022

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The mitochondrial translocator protein (TSPO): a key multifunctional molecule in the nervous system

Léa El Chemali, Yvette Akwa, Liliane Massaad-Massade

Biochem J (2022) 479 (13): 1455–1466.

DOI: https://doi.org/10.1042/BCJ20220050

Published: 12 July 2022

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Improved furfural tolerance in Escherichia coli mediated by heterologous NADH-dependent benzyl alcohol dehydrogenases

Benjamin James Willson, Reyme Herman, Swen Langer, Gavin Hugh Thomas

Biochem J (2022) 479 (10): 1045–1058.

DOI: https://doi.org/10.1042/BCJ20210811

Published: 23 May 2022

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Includes: Supplementary data

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The structure and function of modular Escherichia coli O157:H7 bacteriophage FTBEc1 endolysin, LysT84: defining a new endolysin catalytic subfamily

Michael J. Love, David Coombes, Salim Ismail, Craig Billington, Renwick C. J. Dobson

Biochem J (2022) 479 (2): 207–223.

DOI: https://doi.org/10.1042/BCJ20210701

Published: 28 January 2022

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Includes: Supplementary data

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Making protons tag along with electrons

Matthew J. Guberman-Pfeffer, Nikhil S. Malvankar

Biochem J (2021) 478 (23): 4093–4097.

DOI: https://doi.org/10.1042/BCJ20210592

Published: 06 December 2021

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Intelligent host engineering for metabolic flux optimisation in biotechnology

Lachlan J. Munro, Douglas B. Kell

Biochem J (2021) 478 (20): 3685–3721.

DOI: https://doi.org/10.1042/BCJ20210535

Published: 21 October 2021

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C -type cytochrome-initiated reduction of bacterial lytic polysaccharide monooxygenases

Jessie Branch, Badri S. Rajagopal, Alessandro Paradisi, Nick Yates, Peter J. Lindley, Jake Smith, Kristian Hollingsworth, W. Bruce Turnbull, Bernard Henrissat, Alison Parkin, Alan Berry, Glyn R. Hemsworth

Biochem J (2021) 478 (14): 2927–2944.

DOI: https://doi.org/10.1042/BCJ20210376

Published: 28 July 2021

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Translational regulation in pathogenic and beneficial plant–microbe interactions

Soledad Traubenik, Milagros Ferrari, Flavio Antonio Blanco, María Eugenia Zanetti

Biochem J (2021) 478 (14): 2775–2788.

DOI: https://doi.org/10.1042/BCJ20210066

Published: 23 July 2021

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Hetero-oligomerization of Bacillus thuringiensis Cry1A proteins enhance binding to the ABCC2 transporter of Spodoptera exigua

Daniel Pinos, Noelia Joya, Salvador Herrero, Juan Ferré, Patricia Hernández-Martínez

Biochem J (2021) 478 (13): 2589–2600.

DOI: https://doi.org/10.1042/BCJ20210137

Published: 09 July 2021

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Includes: Supplementary data

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Internalization and membrane activity of the antimicrobial peptide CGA-N12

Ruifang Li, Mengke Tao, Shang Li, Xueqin Wang, Yanhui Yang, Lianfeng Mo, Kaidi Zhang, Ao Wei, Liang Huang

Biochem J (2021) 478 (10): 1907–1919.

DOI: https://doi.org/10.1042/BCJ20201006

Published: 24 May 2021

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Glycoengineering: scratching the surface

Meg Critcher, Timothy O'Leary, Mia L. Huang

Biochem J (2021) 478 (4): 703–719.

DOI: https://doi.org/10.1042/BCJ20200612

Published: 18 February 2021

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Loss of cell wall integrity genes cpxA and mrcB causes flocculation in Escherichia coli

Keita Sugawara, Hayato Toyoda, Mami Kimura, Shunsuke Hayasaka, Hiromi Saito, Hiroshi Kobayashi, Kunio Ihara, Tomoaki Ida, Takaaki Akaike, Eiji Ando, Mamoru Hyodo, Yoshihiro Hayakawa, Shin Hamamoto, Nobuyuki Uozumi

Biochem J (2021) 478 (1): 41–59.

DOI: https://doi.org/10.1042/BCJ20200723

Published: 08 January 2021

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Amyloid-beta oligomers induce Parkin-mediated mitophagy by reducing Miro1

Min Kyoung Kam, Dong Gil Lee, Bokyung Kim, Jae-Won Huh, Hong Jun Lee, Young-Ho Park, Dong-Seok Lee

Biochem J (2020) 477 (23): 4581–4597.

DOI: https://doi.org/10.1042/BCJ20200488

Published: 08 December 2020

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Includes: Supplementary data

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Crystal structure of Leptospira leucine-rich repeat 20 reveals a novel E-cadherin binding protein to induce NGAL expression in HK2 cells

Shen-Hsing Hsu, Chen-Hsi Chu, Ya-Chung Tian, Ming-Yang Chang, Li-Feng Chou, Yuh-Ju Sun, Chih-Wei Yang

Biochem J (2020) 477 (21): 4313–4326.

DOI: https://doi.org/10.1042/BCJ20200547

Published: 13 November 2020

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A structure model explaining the binding between a ubiquitous unconventional G-protein (OsYchF1) and a plant-specific C2-domain protein (OsGAP1) from rice

Ming-Yan Cheung, Jacky Chi-Ki Ngo, Zhongzhou Chen, Qi Jia, Tianjie Li, Yitao Gou, Yi Wang, Hon-Ming Lam

Biochem J (2020) 477 (20): 3935–3949.

DOI: https://doi.org/10.1042/BCJ20200380

Published: 23 October 2020

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Includes: Supplementary data

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Effect of NH 2 -terminal acetylation on the oxygenation properties of vertebrate haemoglobin

Chandrasekhar Natarajan, Anthony V. Signore, Vikas Kumar, Roy E. Weber, Angela Fago, Jay F. Storz

Biochem J (2020) 477 (19): 3839–3850.

DOI: https://doi.org/10.1042/BCJ20200623

Published: 12 October 2020

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Includes: Supplementary data

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Genetic activity during early plant embryogenesis

Ran Tian, Priyanka Paul, Sanjay Joshi, Sharyn E. Perry

Biochem J (2020) 477 (19): 3743–3767.

DOI: https://doi.org/10.1042/BCJ20190161

Published: 12 October 2020

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Includes: Supplementary data

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The ever-expanding limits of enzyme catalysis and biodegradation: polyaromatic, polychlorinated, polyfluorinated, and polymeric compounds

Lawrence P. Wackett, Serina L. Robinson

Biochem J (2020) 477 (15): 2875–2891.

DOI: https://doi.org/10.1042/BCJ20190720

Published: 14 August 2020

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Structure-based enzyme engineering improves donor-substrate recognition of Arabidopsis thaliana glycosyltransferases

Aishat Akere, Serena H. Chen, Xiaohan Liu, Yanger Chen, Sarath Chandra Dantu, Alessandro Pandini, Debsindhu Bhowmik, Shozeb Haider

Biochem J (2020) 477 (15): 2791–2805.

DOI: https://doi.org/10.1042/BCJ20200477

Published: 07 August 2020

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Includes: Supplementary data

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Insights into the unique carboxylation reactions in the metabolism of propylene and acetone

Florence Mus, Hsin-Hua Wu, Alexander B. Alleman, Krista A. Shisler, Oleg A. Zadvornyy, Brian Bothner, Jennifer L. Dubois, John W. Peters

Biochem J (2020) 477 (11): 2027–2038.

DOI: https://doi.org/10.1042/BCJ20200174

Published: 04 June 2020

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Silencing of lncRNA 6030408B16RIK prevents ultrafiltration failure in peritoneal dialysis via microRNA-326-3p-mediated WISP2 down-regulation

Zhikui Wang, Zhongqi Zhou, Wenjie Ji, Lina Sun, Yulin Man, Jifeng Wang, Hongjuan Zhang

Biochem J (2020) 477 (10): 1907–1921.

DOI: https://doi.org/10.1042/BCJ20190877

Published: 29 May 2020

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A steady-state approach for inhibition of heterogeneous enzyme reactions

Jeppe Kari, Corinna Schiano-di-Cola, Stine Fredslund Hansen, Silke Flindt Badino, Trine Holst Sørensen, Ana Mafalda Cavaleiro, Kim Borch, Peter Westh

Biochem J (2020) 477 (10): 1971–1982.

DOI: https://doi.org/10.1042/BCJ20200083

Published: 29 May 2020

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Includes: Supplementary data

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Development of novel anti-malarial from structurally diverse library of molecules, targeting plant-like CDPK1, a multistage growth regulator of P. falciparum

Ravi Jain, Sakshi Gupta, Manoj Munde, Soumya Pati, Shailja Singh

Biochem J (2020) 477 (10): 1951–1970.

DOI: https://doi.org/10.1042/BCJ20200045

Published: 29 May 2020

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Includes: Supplementary data

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Effects of CGA-N12 on the membrane structure of Candida tropicalis cells

Ruifang Li, Weini Shi, Ruiling Zhang, Liang Huang, Yanjie Yi, Aihua Li, Hongjuan Jing, Mengke Tao, Meng Zhang, Nanqi Pei

Biochem J (2020) 477 (10): 1813–1825.

DOI: https://doi.org/10.1042/BCJ20190939

Published: 21 May 2020

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Kringles of substrate plasminogen provide a ‘catalytic switch' in plasminogen to plasmin turnover by Streptokinase

Vandna Sharma, Shekhar Kumar, Girish Sahni

Biochem J (2020) 477 (5): 953–970.

DOI: https://doi.org/10.1042/BCJ20190909

Published: 06 March 2020

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The antifungal peptide CGA-N12 inhibits cell wall synthesis of Candida tropicalis by interacting with KRE9

Ruifang Li, Zhengwei Liu, Weibing Dong, Lan Zhang, Beibei Zhang, Dandan Li, Caiwei Fu

Biochem J (2020) 477 (3): 747–762.

DOI: https://doi.org/10.1042/BCJ20190678

Published: 14 February 2020

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Includes: Supplementary data

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MitoTimer-based high-content screen identifies two chemically-related benzothiophene derivatives that enhance basal mitophagy

Fernanda M. Cerqueira, Noga Kozer, Anton Petcherski, Boris M. Baranovski, Dane Wolf, Essam A. Assali, Yaelle Roth, Roi Gazit, Haim Barr, Eli C. Lewis, Guy Las, Orian S. Shirihai

Biochem J (2020) 477 (2): 461–475.

DOI: https://doi.org/10.1042/BCJ20190616

Published: 31 January 2020

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Includes: Supplementary data

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EJP18 peptide derived from the juxtamembrane domain of epidermal growth factor receptor represents a novel membrane-active cell-penetrating peptide

N.G. Eissa, E.J. Sayers, D. Birch, S.G. Patel, Y.-H. Tsai, H. Mørck Nielsen, A.T. Jones

Biochem J (2020) 477 (1): 45–60.

DOI: https://doi.org/10.1042/BCJ20190452

Published: 08 January 2020

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Articles

Differential proteolytic activation of the Bacillus thuringiensis Cry41Aa parasporin modulates its anticancer effect

Wided Souissi, Arnold Kaloki, Stuart Etherington, Barbara Domanska, Michelle J. West, Neil Crickmore

Biochem J (2019) 476 (24): 3805–3816.

DOI: https://doi.org/10.1042/BCJ20190732

Published: 23 December 2019

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Insights into the biochemical and functional characterization of sortase E transpeptidase of Corynebacterium glutamicum

Aliyath Susmitha, Kesavan Madhavan Nampoothiri, Harsha Bajaj

Biochem J (2019) 476 (24): 3835–3847.

DOI: https://doi.org/10.1042/BCJ20190812

Published: 23 December 2019

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Biphenyl degradation by recombinant photosynthetic cyanobacterium Synechocystis sp. PCC6803 in an oligotrophic environment using unphysiological electron transfer

Takaaki Suzuki, Akito Nishizawa, Masashi Kikuchi, Chihiro Nonaka, Mariko Komuro, Miki Nakayama, Yasuhiro Kashino, Masao Fukuda, Shigenobu Kimura

Biochem J (2019) 476 (23): 3615–3630.

DOI: https://doi.org/10.1042/BCJ20190731

Published: 10 December 2019

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Includes: Supplementary data

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The multifunctional enzyme S-adenosylhomocysteine/methylthioadenosine nucleosidase is a key metabolic enzyme in the virulence of Salmonella enterica var Typhimurium

Asma U. Husna, Nancy Wang, Jonathan J. Wilksch, Hayley J. Newton, Dianna M. Hocking, Iain D. Hay, Simon A. Cobbold, Mark R. Davies, Malcolm J. McConville, Trevor Lithgow, Richard A. Strugnell

Biochem J (2019) 476 (22): 3435–3453.

DOI: https://doi.org/10.1042/BCJ20190297

Published: 21 November 2019

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Amelioration of heavy metal stress by endophytic Bacillus amyloliquefaciens RWL-1 in rice by regulating metabolic changes: potential for bacterial bioremediation

Raheem Shahzad, Saqib Bilal, Muhammad Imran, Abdul Latif Khan, Areej Ahmed Alosaimi, Hussah Abdullah Al-Shwyeh, Hanan Almahasheer, Suriya Rehman, In-Jung Lee

Biochem J (2019) 476 (21): 3385–3400.

DOI: https://doi.org/10.1042/BCJ20190606

Published: 15 November 2019

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A biochemical comparison of fungal GH6 cellobiohydrolases

Stefan Jarl Christensen, Kristian Bertel Rømer Mørkeberg Krogh, Nikolaj Spodsberg, Kim Borch, Peter Westh

Biochem J (2019) 476 (15): 2157–2172.

DOI: https://doi.org/10.1042/BCJ20190185

Published: 05 August 2019

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Screening substrate-binding positions by rolling circle amplification suggesting a binding model of Nt.BstNBI

Hua Wei, Suming Tang, Xuying Duan, Yifu Guan, Guojie Zhao

Biochem J (2019) 476 (10): 1483–1496.

DOI: https://doi.org/10.1042/BCJ20190167

Published: 28 May 2019

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Includes: Supplementary data

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Discerning the mechanism of action of HtrA4: a serine protease implicated in the cell death pathway

Raghupathi Kummari, Shubhankar Dutta, Lalith K. Chaganti, Kakoli Bose

Biochem J (2019) 476 (10): 1445–1463.

DOI: https://doi.org/10.1042/BCJ20190224

Published: 21 May 2019

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Glycolytic flux in Saccharomyces cerevisiae is dependent on RNA polymerase III and its negative regulator Maf1

Roza Szatkowska, Manuel Garcia-Albornoz, Katarzyna Roszkowska, Stephen W. Holman, Emil Furmanek, Simon J. Hubbard, Robert J. Beynon, Malgorzata Adamczyk

Biochem J (2019) 476 (7): 1053–1082.

DOI: https://doi.org/10.1042/BCJ20180701

Published: 04 April 2019

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Cysteine-rich granulin-3 rapidly promotes amyloid-β fibrils in both redox states

Anukool A. Bhopatkar, Gaurav Ghag, Lauren M. Wolf, Dexter N. Dean, Melissa A. Moss, Vijayaraghavan Rangachari

Biochem J (2019) 476 (5): 859–873.

DOI: https://doi.org/10.1042/BCJ20180916

Published: 12 March 2019

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Rational engineering of a malate dehydrogenase for microbial production of 2,4-dihydroxybutyric acid via homoserine pathway

Cláudio J.R. Frazão, Christopher M. Topham, Yoann Malbert, Jean Marie François, Thomas Walther

Biochem J (2018) 475 (23): 3887–3901.

DOI: https://doi.org/10.1042/BCJ20180765

Published: 12 December 2018

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Solution structure of TbCentrin4 from Trypanosoma brucei and its interactions with Ca 2+ and other centrins

Fangzhen Shan, Kaiqin Ye, Jiahai Zhang, Shanhui Liao, Xuecheng Zhang, Chao Xu, Xiaoming Tu

Biochem J (2018) 475 (23): 3763–3778.

DOI: https://doi.org/10.1042/BCJ20180752

Published: 06 December 2018

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Role of ATP during the initiation of microvascularization: acceleration of an autocrine sensing mechanism facilitating chemotaxis by inorganic polyphosphate

Werner E.G. Müller, Maximilian Ackermann, Emad Tolba, Meik Neufurth, Ivan Ivetac, Maria Kokkinopoulou, Heinz C. Schröder, Xiaohong Wang

Biochem J (2018) 475 (20): 3255–3273.

DOI: https://doi.org/10.1042/BCJ20180535

Published: 31 October 2018

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Biochemical and functional characterization of OsCSD3, a novel CuZn superoxide dismutase from rice

Ravi Prakash Sanyal, Amol Samant, Vishal Prashar, Hari Sharan Misra, Ajay Saini

Biochem J (2018) 475 (19): 3105–3121.

DOI: https://doi.org/10.1042/BCJ20180516

Published: 12 October 2018

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Structural insights into oxidation of medium-chain fatty acids and flavanone by myxobacterial cytochrome P450 CYP267B1

Ilona K. Jóźwik, Martin Litzenburger, Yogan Khatri, Alexander Schifrin, Marco Girhard, Vlada Urlacher, Andy-Mark W.H. Thunnissen, Rita Bernhardt

Biochem J (2018) 475 (17): 2801–2817.

DOI: https://doi.org/10.1042/BCJ20180402

Published: 11 September 2018

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Eudesmane-type sesquiterpene diols directly synthesized by a sesquiterpene cyclase in Tripterygium wilfordii

Yu-ru Tong, Ping Su, Hong-yu Guan, Tian-yuan Hu, Jin-long Chen, Yi-feng Zhang, Yu-jun Zhao, Lin-hui Gao, Xia-nan Zhang, Lu-qi Huang, Wei Gao

Biochem J (2018) 475 (17): 2713–2725.

DOI: https://doi.org/10.1042/BCJ20180353

Published: 05 September 2018

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CRISPR base editors: genome editing without double-stranded breaks

Ayman Eid, Sahar Alshareef, Magdy M. Mahfouz

Biochem J (2018) 475 (11): 1955–1964.

DOI: https://doi.org/10.1042/BCJ20170793

Published: 11 June 2018

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A plasmid borne, functionally novel glycoside hydrolase family 30 subfamily 8 endoxylanase from solventogenic Clostridium

Franz J. St John, Diane Dietrich, Casey Crooks, Peter Balogun, Vesna de Serrano, Edwin Pozharski, James Kennon Smith, Elizabeth Bales, Jason Hurlbert

Biochem J (2018) 475 (9): 1533–1551.

DOI: https://doi.org/10.1042/BCJ20180050

Published: 04 May 2018

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CGA-N12, a peptide derived from chromogranin A, promotes apoptosis of Candida tropicalis by attenuating mitochondrial functions

Ruifang Li, Ruiling Zhang, Yanhui Yang, Xueqin Wang, Yanjie Yi, Pei Fan, Zhengwei Liu, Chen Chen, Junpeng Chang

Biochem J (2018) 475 (7): 1385–1396.

DOI: https://doi.org/10.1042/BCJ20170894

Published: 16 April 2018

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Restricted HIV-1 Env glycan engagement by lectin-reengineered DAVEI protein chimera is sufficient for lytic inactivation of the virus

Bibek Parajuli, Kriti Acharya, Harry C. Bach, Bijay Parajuli, Shiyu Zhang, Amos B. Smith, III, Cameron F. Abrams, Irwin Chaiken

Biochem J (2018) 475 (5): 931–957.

DOI: https://doi.org/10.1042/BCJ20170662

Published: 09 March 2018

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The ethical concerns about transgenic crops

Agnès E. Ricroch, Michèle Guillaume-Hofnung, Marcel Kuntz

Biochem J (2018) 475 (4): 803–811.

DOI: https://doi.org/10.1042/BCJ20170794

Published: 28 February 2018

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First biochemical and crystallographic characterization of a fast-performing ferritin from a marine invertebrate

Evelien De Meulenaere, Jake Brian Bailey, Faik Akif Tezcan, Dimitri Dominique Deheyn

Biochem J (2017) 474 (24): 4193–4206.

DOI: https://doi.org/10.1042/BCJ20170681

Published: 11 December 2017

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