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Volume 413, Issue 3

August 2008

All Issues

Cover Image

Cover Image
Front Matter
Table of Contents
Editorial Board

ISSN 0264-6021

EISSN 1470-8728

In this Issue

Review articles
Research articles
Correction articles
Commentaries

Review articles

Structure, mechanism and regulation of pyruvate carboxylase

Sarawut Jitrapakdee; Martin St Maurice; Ivan Rayment; W. Wallace Cleland; John C. Wallace; Paul V. Attwood

Biochem J (2008) 413 (3): 369–387.

Abstract

View Articletitled, Structure, mechanism and regulation of pyruvate carboxylase

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A role for actin in regulating apoptosis/programmed cell death: evidence spanning yeast, plants and animals

Vernonica E. Franklin-Tong; Campbell W. Gourlay

Biochem J (2008) 413 (3): 389–404.

Abstract

View Articletitled, A role for actin in regulating apoptosis/programmed cell death: evidence spanning yeast, plants and animals

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Research articles

Biliverdin reductase is a transporter of haem into the nucleus and is essential for regulation of HO-1 gene expression by haematin

Cicerone Tudor; Nicole Lerner-Marmarosh; Yves Engelborghs; Peter E. M. Gibbs; Mahin D. Maines

Biochem J (2008) 413 (3): 405–416.

Abstract

View Articletitled, Biliverdin reductase is a transporter of haem into the nucleus and is essential for regulation of HO-1 gene expression by haematin

Supplementary data

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Insights into the substrate specificity of plant peptide deformylase, an essential enzyme with potential for the development of novel biotechnology applications in agriculture

Lynnette M. A. Dirk; Jack J. Schmidt; Yiying Cai; Jonathan C. Barnes; Katherine M. Hanger; Nihar R. Nayak; Mark A. Williams; Robert B. Grossman; Robert L. Houtz; David W. Rodgers

Biochem J (2008) 413 (3): 417–427.

Abstract

View Articletitled, Insights into the substrate specificity of plant peptide deformylase, an essential enzyme with potential for the development of novel biotechnology applications in agriculture

Supplementary data

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Phosphorylation of Argonaute 2 at serine-387 facilitates its localization to processing bodies

Yan Zeng; Heidi Sankala; Xiaoxiao Zhang; Paul R. Graves

Biochem J (2008) 413 (3): 429–436.

Abstract

View Articletitled, Phosphorylation of Argonaute 2 at serine-387 facilitates its localization to processing bodies

Supplementary data

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Increasing the expression of calcium-permeable TRPC3 and TRPC7 channels enhances constitutive secretion

Verna Lavender; Setareh Chong; Katherine Ralphs; Adrian J. Wolstenholme; Barbara J. Reaves

Biochem J (2008) 413 (3): 437–446.

Abstract

View Articletitled, Increasing the expression of calcium-permeable TRPC3 and TRPC7 channels enhances constitutive secretion

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Biochemical function of typical and variant Arabidopsis thaliana U-box E3 ubiquitin-protein ligases

Jakob Wiborg; Charlotte O'Shea; Karen Skriver

Biochem J (2008) 413 (3): 447–457.

Abstract

View Articletitled, Biochemical function of typical and variant Arabidopsis thaliana U-box E3 ubiquitin-protein ligases

Supplementary data

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High Cu(I) and low proton affinities of the CXXC motif of Bacillus subtilis CopZ

Liang Zhou; Chloe Singleton; Nick E. Le Brun

Biochem J (2008) 413 (3): 459–465.

Abstract

View Articletitled, High Cu(I) and low proton affinities of the CXXC motif of Bacillus subtilis CopZ

Supplementary data

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Endosomal compartment contributes to the propagation of CD95/Fas-mediated signals in type II cells

Paola Matarrese; Valeria Manganelli; Tina Garofalo; Antonella Tinari; Lucrezia Gambardella; Kenneth Ndebele; Roya Khosravi-Far; Maurizio Sorice; Mauro Degli Esposti; Walter Malorni

Biochem J (2008) 413 (3): 467–478.

Abstract

View Articletitled, Endosomal compartment contributes to the propagation of CD95/Fas-mediated signals in type II cells

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S-nitrosylation of syntaxin 1 at Cys¹⁴⁵ is a regulatory switch controlling Munc18-1 binding

Zoë J. Palmer; Rory R. Duncan; James R. Johnson; Lu-Yun Lian; Luciane V. Mello; David Booth; Jeff W. Barclay; Margaret E. Graham; Robert D. Burgoyne; Ian A. Prior; Alan Morgan

Biochem J (2008) 413 (3): 479–491.

Abstract

View Articletitled, S-nitrosylation of syntaxin 1 at Cys145 is a regulatory switch controlling Munc18-1 binding

Supplementary data

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Reduction of S-nitrosoglutathione by alcohol dehydrogenase 3 is facilitated by substrate alcohols via direct cofactor recycling and leads to GSH-controlled formation of glutathione transferase inhibitors

Claudia A. Staab; Johan Ålander; Margareta Brandt; Johan Lengqvist; Ralf Morgenstern; Roland C. Grafström; Jan-Olov Höög

Biochem J (2008) 413 (3): 493–504.

Abstract

View Articletitled, Reduction of S-nitrosoglutathione by alcohol dehydrogenase 3 is facilitated by substrate alcohols via direct cofactor recycling and leads to GSH-controlled formation of glutathione transferase inhibitors

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Association of human DNA helicase RecQ5β with RNA polymerase II and its possible role in transcription

Keiichi Izumikawa; Mitsuaki Yanagida; Toshiya Hayano; Hiroyuki Tachikawa; Wataru Komatsu; Akira Shimamoto; Kazunobu Futami; Yasuhiro Furuichi; Takashi Shinkawa; Yoshio Yamauchi; Toshiaki Isobe; Nobuhiro Takahashi

Biochem J (2008) 413 (3): 505–516.

Abstract

View Articletitled, Association of human DNA helicase RecQ5β with RNA polymerase II and its possible role in transcription

Supplementary data

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Elimination of competing hydrolysis and coupling side reactions of a cyclodextrin glucanotransferase by directed evolution

Ronan M. Kelly; Hans Leemhuis; Henriëtte J. Rozeboom; Niels van Oosterwijk; Bauke W. Dijkstra; Lubbert Dijkhuizen

Biochem J (2008) 413 (3): 517–525.

Abstract

View Articletitled, Elimination of competing hydrolysis and coupling side reactions of a cyclodextrin glucanotransferase by directed evolution

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Functional characterization of ribosomal P1/P2 proteins in human cells

Francisco Martinez-Azorin; Miguel Remacha; Juan P. G. Ballesta

Biochem J (2008) 413 (3): 527–534.

Abstract

View Articletitled, Functional characterization of ribosomal P1/P2 proteins in human cells

Supplementary data

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Analysis of mutant origin recognition complex with reduced ATPase activity in vivo and in vitro

Masaya Takehara; Masaki Makise; Hitomi Takenaka; Teita Asano; Tohru Mizushima

Biochem J (2008) 413 (3): 535–543.

Abstract

View Articletitled, Analysis of mutant origin recognition complex with reduced ATPase activity in vivo and in vitro

Supplementary data

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Proteomic analysis of polymeric salivary mucins: no evidence for MUC19 in human saliva

Karine Rousseau; Sara Kirkham; Lindsay Johnson; Brian Fitzpatrick; Marj Howard; Emily J. Adams; Duncan F. Rogers; David Knight; Peter Clegg; David J. Thornton

Biochem J (2008) 413 (3): 545–552.

Abstract

View Articletitled, Proteomic analysis of polymeric salivary mucins: no evidence for MUC19 in human saliva

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Identification of an iron–hepcidin complex

Sébastien Farnaud; Chiara Rapisarda; Tam Bui; Alex Drake; Richard Cammack; Robert W. Evans

Biochem J (2008) 413 (3): 553–557.

Abstract

View Articletitled, Identification of an iron–hepcidin complex

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Orphan nuclear receptor SHP interacts with and represses hepatocyte nuclear factor-6 (HNF-6) transactivation

Yong-Soo Lee; Don-Kyu Kim; Yong Deuk Kim; Ki Cheol Park; Minho Shong; Hyun-A Seong; Hyun Jung Ha; Hueng-Sik Choi

Biochem J (2008) 413 (3): 559–569.

Abstract

View Articletitled, Orphan nuclear receptor SHP interacts with and represses hepatocyte nuclear factor-6 (HNF-6) transactivation

Supplementary data

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Correction articles

The cross-talk between NF-κB and HIF-1: further evidence for a significant liaison

A. Görlach; S. Bonello

Biochem J (2008) 413 (3): 571.

Extract

View Articletitled, The cross-talk between NF-κB and HIF-1: further evidence for a significant liaison

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Commentaries

Phosphorylation of Argonaute proteins: regulating gene regulators

Sabine Rüdel; Gunter Meister

Biochem J (2008) 413 (3): e7–e9.

Abstract

View Articletitled, Phosphorylation of Argonaute proteins: regulating gene regulators

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CD95 ligation and intracellular membrane flow

Roland Reinehr; Dieter Häussinger

Biochem J (2008) 413 (3): e11–e12.

Abstract

View Articletitled, CD95 ligation and intracellular membrane flow

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Activin E is a transforming growth factor β ligand that signals specifically through activin receptor-like kinase 7

Correction: Proteasome and thiol involvement in quality control of glycosylphosphatidylinositol anchor addition

Expression of Concern: Protease-activated receptor-2 promotes kidney tubular epithelial inflammation by inhibiting autophagy via the PI3K/Akt/mTOR signalling pathway

Expression of nNOS alpha and beta isoforms in skeletal muscle of mice

AMP-activated protein kinase can be allosterically activated by ADP but AMP remains the key activating ligand

Review articles

Structure, mechanism and regulation of pyruvate carboxylase

A role for actin in regulating apoptosis/programmed cell death: evidence spanning yeast, plants and animals

Research articles

Biliverdin reductase is a transporter of haem into the nucleus and is essential for regulation of HO-1 gene expression by haematin

Insights into the substrate specificity of plant peptide deformylase, an essential enzyme with potential for the development of novel biotechnology applications in agriculture

Phosphorylation of Argonaute 2 at serine-387 facilitates its localization to processing bodies

Increasing the expression of calcium-permeable TRPC3 and TRPC7 channels enhances constitutive secretion

Biochemical function of typical and variant Arabidopsis thaliana U-box E3 ubiquitin-protein ligases

High Cu(I) and low proton affinities of the CXXC motif of Bacillus subtilis CopZ

Endosomal compartment contributes to the propagation of CD95/Fas-mediated signals in type II cells

S-nitrosylation of syntaxin 1 at Cys¹⁴⁵ is a regulatory switch controlling Munc18-1 binding

Reduction of S-nitrosoglutathione by alcohol dehydrogenase 3 is facilitated by substrate alcohols via direct cofactor recycling and leads to GSH-controlled formation of glutathione transferase inhibitors

Association of human DNA helicase RecQ5β with RNA polymerase II and its possible role in transcription

Elimination of competing hydrolysis and coupling side reactions of a cyclodextrin glucanotransferase by directed evolution

Functional characterization of ribosomal P1/P2 proteins in human cells

Analysis of mutant origin recognition complex with reduced ATPase activity in vivo and in vitro

Proteomic analysis of polymeric salivary mucins: no evidence for MUC19 in human saliva

Identification of an iron–hepcidin complex

Orphan nuclear receptor SHP interacts with and represses hepatocyte nuclear factor-6 (HNF-6) transactivation

Correction articles

The cross-talk between NF-κB and HIF-1: further evidence for a significant liaison

Commentaries

Phosphorylation of Argonaute proteins: regulating gene regulators

CD95 ligation and intracellular membrane flow

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